Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00473 ATGGCTGCAACTCAGGCTAATGATCCTAGAAGCATAGTTTCTATTTCAAAGGTTGTGTCTGTGAATCCAAAACTCGTGCAACCTCAGAGGGTTTTGCCTCTTTCAAATTTGGACAGGCAGTGTCCACACCTCATGCACTTGGTGTTCTTCTACAATAACCTGCCTCACCAGAGGTTGAAGGACTTGTCCCTCAATTCAGTGTTCTGCAGCTTGAAATCTGGCTTGGAAGATACCTTGGCTCTGTGGTATCCTGCTGCAGGTAGGCTTTGGCCGAATCAAAGTGATAGCAAGCTCAACCTGTGGTGCAACAACCATGGTGCAGTTCTTGCAGAGGCTGAAACCTCTGCTAAAATCTCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAATATGCCGCTGATTGTTGCTCAGGTCACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCTTTGTTCGATGGGCCAGCAACCTATGAATTCTTGCGTGCATGGGCTTCAAATTCGGAAATTGTGAAAGGAAGAAGCAGATCTGATGAGGTTCCAAAGCCAGTGCATGAGAGAGGCATGCTTCTGAGCGGTACTCTTGAAGCAGCAAGAGAGACTGGAAATTTTCCTTCAGACACAAGTTCAAATTCTAAAGAAGAAAGGGCCATGGCAGTAGATCACTTATATAATCTTATAATGCAAACAGCTTGTGCACAAAAGGGTTTTCCTCTGCAAATTGGAACAGCCTCGAATTCAAAGAAGTGTGTTCTTAAAACGTATCATGTTTCAGGTGCAATGACAGAAAACTTGAAAAGGAAACACTTCCCCATGCAAAGAGGTTCATTTCCTTTCTCAACCTTTGAGGTTCTTGCAGCTCACCTTTGGAAGGCAAGGAGCAAAGCATTAGGGGTGAAAAAGGAAAAACAAGTATGCCTCCAATTTGCAGTGGACATAAGGAACAAGACGAGACCACCATTGCCAAAGTGTTTCAGTGGAAATGCATATGTTCTTGCATCGATCATGATGCCAATGGGAGAACTGGAAAATGCAAGCCATGAAAGCATCATTGAGAAAATAAGAGAGGCGAAGAACAAAGTGAACCACGATTACGTGAGAAGCTACGTTGAAGCATTAGAAGGAGCAGAACAAGGTTCTTCTCTTCCTCCACTTAAGGAGCTCACTCTGGTTTCTGATTGGACAAGAATGCCTTTTCACAACATTCAGTTCTTCCATGGAAAACCAACCTATGCATCCCCTCTTGCCACTCCTATCCCACAGGTCGCTTACTTCATGCAAAGCCCTACTGACAACAATGCCGTCGACGTCAGAATTGGCTTGGAAGCTGAACATATAAGTGCTTTTAATCACTGCTTTCTAACCATGGCCTCCTGA 1440 0.4382 MAATQANDPRSIVSISKVVSVNPKLVQPQRVLPLSNLDRQCPHLMHLVFFYNNLPHQRLKDLSLNSVFCSLKSGLEDTLALWYPAAGRLWPNQSDSKLNLWCNNHGAVLAEAETSAKISQLGNLSEYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYEFLRAWASNSEIVKGRSRSDEVPKPVHERGMLLSGTLEAARETGNFPSDTSSNSKEERAMAVDHLYNLIMQTACAQKGFPLQIGTASNSKKCVLKTYHVSGAMTENLKRKHFPMQRGSFPFSTFEVLAAHLWKARSKALGVKKEKQVCLQFAVDIRNKTRPPLPKCFSGNAYVLASIMMPMGELENASHESIIEKIREAKNKVNHDYVRSYVEALEGAEQGSSLPPLKELTLVSDWTRMPFHNIQFFHGKPTYASPLATPIPQVAYFMQSPTDNNAVDVRIGLEAEHISAFNHCFLTMAS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00473 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 442 - -
Vian7g00473 479 Pfam Transferase family 17 473 - -
Vian7g00473 479 Gene3D - 10 219 IPR023213 -
Vian7g00473 479 Gene3D - 256 476 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00473 Vian-Chr7 11913777 11917342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00473 13 470 Monolignol Biosynthesis Gene Families AT5G48930 24.573 1.24e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00473 K15400 - gmx:100803347 785.408