Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00470 ATGGAAGGAAGAAGCAAGAAGGAGGCATACTTTTGTGACAGAGGAAGCATCTTCTCTTGTGCTGCAGAGGCACCTCCTAGTCCAAGCACTCCGCTTCAGCATCCACATGAGAAGAAACAGGTATCTGTTGAGGAAGAAGAGGAAGAAAATAAGGAGTCAAAGCATGGTGCTGTATTGGATCTAAATGTTTCAGGTGATGATTCTTGCAGTGCAGAAGCACTAGAACTGAATCTCATAACCTGTTTGGATGTGGGGTCATCATCCATTAGTGGCAATTCTTCTTCAGAAGTCCCTCTTGCTTCTGATGCTGCTGAGCCAAGAGTCTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTTGGTGGGCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTTGGCCTTCCCTTACTGCATAATAACACCCACTATGCAAGCATGGCTTCCCTACCCCTTTATGGTGCTACCAATAGTAGAGGAGGACCTCTTGGAATTCAAGCACACTCCATGATCCAAAAGCCCTCTCATCACCATCATCATCATCATCATCATCATGTGACTGGATTTGGAAACTCTTATGCACACCACCATGGTTGGTCAAGACCCGTCATTGACCAACAACCTGGAATAGCAAAACTACCGGTGGCTGATTTTCACAGAACAAAATCAGCATTTTCATCATCACAAACAAGTGTTGGTAGGTTTGAAATGGCTAACACCCTGATGAATTCTTCAGCCAATAAGGAAATCGGTGGATGTGTGGCCGGTGCTGAAACTCGTTTGAAGAGCAATAATCAAGAAGAAATGAAGCACCTTGATTTATCCCTCAAGCTCTAA 891 0.4478 MEGRSKKEAYFCDRGSIFSCAAEAPPSPSTPLQHPHEKKQVSVEEEEEENKESKHGAVLDLNVSGDDSCSAEALELNLITCLDVGSSSISGNSSSEVPLASDAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHNNTHYASMASLPLYGATNSRGGPLGIQAHSMIQKPSHHHHHHHHHHVTGFGNSYAHHHGWSRPVIDQQPGIAKLPVADFHRTKSAFSSSQTSVGRFEMANTLMNSSANKEIGGCVAGAETRLKSNNQEEMKHLDLSLKL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00470 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Vian7g00470 296 MobiDBLite consensus disorder prediction 37 56 - -
Vian7g00470 296 Gene3D Classic Zinc Finger 99 149 - -
Vian7g00470 296 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Vian7g00470 296 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 7 296 IPR044246 GO:0009788
Vian7g00470 296 SUPERFAMILY beta-beta-alpha zinc fingers 106 136 IPR036236 -
Vian7g00470 296 MobiDBLite consensus disorder prediction 22 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00470 Vian-Chr7 11870384 11871274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00470 27 296 C2H2 Transcription Factor Family AT5G10970 37.545 3.35e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00470 - - gmx:100809569 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00470 7 11870384 11871274 Vian4g02022 4 36883048 36883839 PCT