Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00457 ATGGTTGGTTTGAGTAATAGTAGTAATTTTGTCTTCCATAATATTTGGGGCAGCAATACTGCTACTCAGCACACAGTTCCTGGTGGTACAAAAGCGGCAGAATCTTTTTCTTTTCCAGGTCAGTACCGAGGTACATACCCTGCATTTGGTCTAAATATTTGCTGCTCAGATATTCACACTACACCAAATATTGCTTCAGAGTGGGGCTCACCTAAGTATGCAACTCCTTATATGAGTGGGTGTCCTCGTGTGTTCTGCATGGGAAAAAGTGGCCATCTTCTTCTTAGCCATACAGGGCTTCTTGGTGTTGTGTGCTCATGCCATTGTTCCCACATGTCTGTTCTTAAGTTTTGTGAGCACTCGGGTTTACATGGTGGTGACCCAGGGGATGCTGTTTGTATGGAGAGTGGGGAGACCATTTCACAATGGCGGAAGCTTTACTTCTTGAAGTTTGGGATTAGGTCTCTGGGGAATGAGAATGGATGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTCCGATGAAATCCAATGCATCCGTGTTTGATATGTCCAAGACTAATTTGTCTCATATTTTGAGTTCATCTGCAGTCATGTCAAGGTCTGGAAAGTCTTCTGACTATGTCATGTTTCCAAATAATGCTCATATGGACAACAATTTATTTATTGGTACATTGTCCAGAAAACAAGCAACAACAATCCAGGATGGTTGCAACATTCCACTCAAAGGTTTTCCTGGTATTTCACAAAACAGCTTTGTTGATTTGTTGAAAAGCCAGTTAATGGAATCTAATCTGGCTATGTACACAACTGCACCAAATTTTGGTGGAACTCAGCTAGATGATGGTTGTCATCCTATACCTCCTTTCTTGGATTCTCTGAAAACGAAAGTAAGTTTGTCAACGGTCCACTCACCTTTGCAAACACCAACAAACCTTTTGAAAGACCATGATTGCATAAAAACAAAAGCAAATGGTCTTGTAGGCAGAGATGCGGCTTCATCTAATGTTGACCTTAGGCTTGGTCAACCACCTCAGACAGGAAACCCACTTCCATCATTTGTAGAACCACTGCAGTTTAATATCCTTGCCAGTACACCAAAACTGCAACCGCAGAAGCAGATGATTAATAACCTCAGCAGGGAGGAGGGATTACAGAATAATTTTAGATATTCTGCTGCTTCATTCAAATTGGTTGAAGAATTGCCTCAGCTTAAACCCAAGAACTATATGTCAGCTGTGGGTAAGGCTTCTGTTAAAGCTAGATCAGAAACACAAAATGTGGCCAAGGGTGTATCATTTTCACCATTTTTGCAAGTTGATGTACCTGGAAGAAAGACACAAGCTAGTGAAAATTTGTGGGCTGATGACAGCCCTAACATGCCTAAGAAACTGTATTCTGATTATGGTCTCATAGGAAGGCAATCAAATAAATCTGTCGTAGGGACCAATAAATATTTGGAAAATAATATAGGGGTGAGCTTTGCCAAAGATTCTGGTGGCAAAAGAAATCCGGGGTTTGGAATTGGTCAGTTAATGAAATATCCAAGCTCCATGATGAGATCTGTTGGTGGTTATGATAGTTGTATTTCAGTTGTTAACGAAAAGATGTATGAACCAAATTTTGAATCTAGCTTGCCATCAGATACATTGGTGCGGGCAAATATTTTGCATGGTTCACACAATACGTCTTCTCTTGGGCTAGAAAATTATATGATGAATCCTCAGACCTCCATTCCATTTAAAGAGATTTTGAAAGGCCCTCCCTATCATGTTTCAGTTTCTGTGTCAAATCAGACTCCGACTTTGCCACAGCAGCAGACCATTAATAGGGATGCTTATTTTGTTGATGAAAACACGAGGTTGCTTGGTGTGACACAGATACCAGAGTTATCTAAGCAATATCATGCATTGCATTTTAATATGAATCAGAAGCAAGGGGGATCCAGCAGTATTTTGAAATTTCAGCATTATACTTGTGAGGCTTCAACATCTGAACAGGGAACCTCTTGTGCAAGATTGAAATTGCCTCAAAATAAGTCGATATTTGGGAATCATGAGAATACTGTTGGTTTAGAGAAGTTGCCTTCCCTCACAGGTATGAACGGATATTATCATTTGTCTGACTTGTCACCAACACCTTTACATTCTAAAGAAAAGGAATCACAATGTAAACATTCTTATGATCTTCAAAATGAAGAGACTTCTTTAAGCCTTGGTATAAACAAAGACAATATCAGATCTAGTACATGTGAAAAATACTCTGAGCAATCGCCAAATATATGTTTGGAAGGCAAGTATCCTTGTCCTGCTCTGATAAACTGTTGCCGTAGCAACTTTTCCTCAGGGATTGAACCCCTTCGTAAGAACCTAGGGCAACAACTTGCTGATGTCAGTGGTGAAACTTCTTTGAAGATGCCTTCAGATTTGTTTAGAAATCTGAATACTACGAACAACGGAAATATCCACTTTGAGCAAGGTGGGCATGCTCCTCAATGGAGAGATGTGCCCAGTAAGGTCAGGAAAGCAGTTTGTGATGCGACATCTTTAGATCAAACATTTAATGGTTTCGATAAGGAAGCACGAGATGGTTTTCAACTTGGAAACATTTCCACAAAATGCTCCAAAATAACCACTGATATGGGAGACCTGTCAGAAGAGAAAGAAAATTCTAATGTTTCTTCTGGATGCTCTGCTCCTGTGATTACTCAGGCATCTGTGATGGTGAACAAAATTGATTACTGTACTGATGAAGCTATAGACACTGGCGTTGTCAACAAGCTCGAAGTTGATGAAGGGTCAGGTATTGATCAAGGCTCCATGTCAGATTTGGTTGGAAGTGAAAGAACCGGTGAGTCTCTAGGCTTGATCTCTGGGAATTATTTGAAAAATGGTTGTTCGAGAGTGTTGAATGATGAATCATGTTGCGATCTACTTGATGATCTTAAACTGTTAGATTCCTTGATATGGAAGAAAGAAAGGAATCAAAATCATTTTGTGCTTTCTGCTAATTGTAAAATCAATCAATCTCAAAATGTCAAGAGGGGCATCAATGGAAGAAAGCGAAAGAGAAATGTGGTGAAGATTCTAGATGCTTCATTATCTTCTGAATTCCCTTCCTTGTTGCACAATAAGAATAATGAAGATGCTGAGATTTTTAATTCCTCTTCTAATTTGTCAAAAGAAATGCAAATGCATTCTCTGCCTAGCCTGCAGAAATCATTTAACAAGTCTTCCTTTGTTCAATCTTGTAACACACGAATACAGTCCGCATTTGCATCTAAATTTGTTTCCTGTAAGAATCGTCGGAGCAAGCATCTCATTCATAAAGTTTCCTATGAGTCTCTATCAGATTCTGATGCTGAGTTTCACTCACCGCCTGTATTTTCTGGAACAAAGAGATTGAGAAAGAATCTCACTTCTGATTTTGAGCAGTTTCATATACAAGAACCATCCTATGAGGAACCTGAAAATGGTAAGTTGAGGCCATTCTTATGCAGGAAGGAAAATCATCATAGAACAAGGCCAGTAGTATGTGGAAAACATGGTGAAATTTGTAAAGAACATTTGGCTAAAGAGGTGCAAAAGCCTGCAAAAATTGTATCCCTCAGGAAGGTCCTTAAGTCTTCCAAAAGGTGTATGAGCCACACAAATGGAAAACCTAGACTAACTTCAAAAAAGCAATGGAAGAAATTGAGCATTGGAACAGATAGTGGGTCCTTCTGTGGGAACCATGGTTTAAAAATTAAAGAACACGGTGAAACACAAACTACAATAATTTATAATGAAGCAAATGTTGATATGTCCTTGGAAGACTTGGAGAGAGGTGGCAAGCAAGATGCTAAAGCTAAAGCTAAGCAGGGTGTTAGGGTTGGAAATAGAGAAAATGTTCGATTGAAGACGAAGAACAAGGACATTCGGAAACACCGCAGCATTAATGAGCTCACTGCTAAAGAAACCAAAGTGACGGATATGATAAGTTGTGCTCAAGACAGAGAGACTGGTTTGTGTAGCCCAAAAAGTAGAAACTCTAGTCAAGGTCATCTAAACATATCTACTATAAACTCAGATACCTTCTGCTGTGTGTGTCAAAGCTCAAGCAATGATAAAATCAACTGTTTGTTGGAATGTTGTCAATGCCTAATTCGAGTGCACCAAGCTTGCTATGGTGTTTCCACATTACCCAAAAGAAGTCGCTGGTGTTGCAGACCATGCCGGACCAACTCAAAAAATATTGCATGTGTCCTATGTGGTTATGGAGGTGGGGCCATGACTCGAGCAGCAATGAGTCATGCGATTGTCAAGAGCCTCCTAAAAGTGTGGAATGGTGAGAAAGATGGCATGCCTAAGCATACAACTTCATGTGAATTTTTTGGAAAGGAAATATATGCATTCCCATCCTCAAAGGCTGGTCAAGAAAGTGTTTTAAAGACAAAAATCCATGATACATCAACAGATCTGGTGAAAGTTCAAATATCTACAAATCATATGCAGCATACCCTCACTAGTCTTTCTAATTTTAAGGTACACAACAGCATTACTGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGTCTTTGGACTCCTGGAACAAGATGCCCGAATGTTGACACCATGAGTGCTTTTGATGTATCTGGTGTTGCGCGTCCCAGGGCAGATGTGGTTTGTTCCATTTGCAATCGATGGGGTGGTTCTTGTATAGAGTGCAGGGTGGCTGATTGCTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAAAGTGAGACTGAAGGTATTGATGATGAAAAGATTGGATTTTATGGAAGATGCATGCTTCATGCTATTGAACCTAGATATCTGTCCATGTATGATCCTATTGATGAAATGGGAAATCAAGAAGAAAAGGAATTCACCTGTGCCAGGGTAGAGGGTTACAAGGGAAGAAGATGGGATGGTTTTCAGGATAATCACTGCCAAGGTGGATGCCTTGTTCCTGAGGAGCAGCTTAATGCTTGGATTCACATCAATGGGCAGAAATTATGTTCTCAAGGACTCATAAAATTCCCCGATTTGGATATGGAGCATGATTGTCGAAAGGAATACGCTCGGTACAAACAAGCAAAGGGATGGAAACACCTTGTTGTGTACAAATCCCGTATACACGCACTTGGTCTTTACACTTCTCGATTCATTTCCCGGGGTGAAGTGGTGGTTGAATATGTTGGTGAAATTGTGGGATTGCGTGTGGCTGATAAAAGGGAGAAGGATTATCAATCTGGAAAGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGGGGGATTGCTCGGTTTGTTAACCACTCGTGCCTGCCAAATTGCGTGGCAAAAGTGATTACTGTAAGGCATGAAAAGAAGGTTGTTTTCTTTGCTGAGAGGGATATATTTCCTGGTGAAGAGATTACGTATGATTACCACTTTAACCACGAGGACGAAGGAAAGATTCCATGCTACTGCAATTCAAAAAATTGCAGGCGCTATATGAACTGA 5577 0.4025 MVGLSNSSNFVFHNIWGSNTATQHTVPGGTKAAESFSFPGQYRGTYPAFGLNICCSDIHTTPNIASEWGSPKYATPYMSGCPRVFCMGKSGHLLLSHTGLLGVVCSCHCSHMSVLKFCEHSGLHGGDPGDAVCMESGETISQWRKLYFLKFGIRSLGNENGWDWPEVLSTTGSPMKSNASVFDMSKTNLSHILSSSAVMSRSGKSSDYVMFPNNAHMDNNLFIGTLSRKQATTIQDGCNIPLKGFPGISQNSFVDLLKSQLMESNLAMYTTAPNFGGTQLDDGCHPIPPFLDSLKTKVSLSTVHSPLQTPTNLLKDHDCIKTKANGLVGRDAASSNVDLRLGQPPQTGNPLPSFVEPLQFNILASTPKLQPQKQMINNLSREEGLQNNFRYSAASFKLVEELPQLKPKNYMSAVGKASVKARSETQNVAKGVSFSPFLQVDVPGRKTQASENLWADDSPNMPKKLYSDYGLIGRQSNKSVVGTNKYLENNIGVSFAKDSGGKRNPGFGIGQLMKYPSSMMRSVGGYDSCISVVNEKMYEPNFESSLPSDTLVRANILHGSHNTSSLGLENYMMNPQTSIPFKEILKGPPYHVSVSVSNQTPTLPQQQTINRDAYFVDENTRLLGVTQIPELSKQYHALHFNMNQKQGGSSSILKFQHYTCEASTSEQGTSCARLKLPQNKSIFGNHENTVGLEKLPSLTGMNGYYHLSDLSPTPLHSKEKESQCKHSYDLQNEETSLSLGINKDNIRSSTCEKYSEQSPNICLEGKYPCPALINCCRSNFSSGIEPLRKNLGQQLADVSGETSLKMPSDLFRNLNTTNNGNIHFEQGGHAPQWRDVPSKVRKAVCDATSLDQTFNGFDKEARDGFQLGNISTKCSKITTDMGDLSEEKENSNVSSGCSAPVITQASVMVNKIDYCTDEAIDTGVVNKLEVDEGSGIDQGSMSDLVGSERTGESLGLISGNYLKNGCSRVLNDESCCDLLDDLKLLDSLIWKKERNQNHFVLSANCKINQSQNVKRGINGRKRKRNVVKILDASLSSEFPSLLHNKNNEDAEIFNSSSNLSKEMQMHSLPSLQKSFNKSSFVQSCNTRIQSAFASKFVSCKNRRSKHLIHKVSYESLSDSDAEFHSPPVFSGTKRLRKNLTSDFEQFHIQEPSYEEPENGKLRPFLCRKENHHRTRPVVCGKHGEICKEHLAKEVQKPAKIVSLRKVLKSSKRCMSHTNGKPRLTSKKQWKKLSIGTDSGSFCGNHGLKIKEHGETQTTIIYNEANVDMSLEDLERGGKQDAKAKAKQGVRVGNRENVRLKTKNKDIRKHRSINELTAKETKVTDMISCAQDRETGLCSPKSRNSSQGHLNISTINSDTFCCVCQSSSNDKINCLLECCQCLIRVHQACYGVSTLPKRSRWCCRPCRTNSKNIACVLCGYGGGAMTRAAMSHAIVKSLLKVWNGEKDGMPKHTTSCEFFGKEIYAFPSSKAGQESVLKTKIHDTSTDLVKVQISTNHMQHTLTSLSNFKVHNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVARPRADVVCSICNRWGGSCIECRVADCSVKFHPWCAHQKNLLQSETEGIDDEKIGFYGRCMLHAIEPRYLSMYDPIDEMGNQEEKEFTCARVEGYKGRRWDGFQDNHCQGGCLVPEEQLNAWIHINGQKLCSQGLIKFPDLDMEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEVVVEYVGEIVGLRVADKREKDYQSGKKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGKIPCYCNSKNCRRYMN 1858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00457 1858 ProSiteProfiles Zinc finger PHD-type profile. 1357 1408 IPR019787 -
Vian7g00457 1858 SUPERFAMILY FYVE/PHD zinc finger 1354 1411 IPR011011 -
Vian7g00457 1858 SMART set_7 1714 1841 IPR001214 GO:0005515
Vian7g00457 1858 Pfam Tify domain binding domain 100 146 IPR032308 -
Vian7g00457 1858 Gene3D SET domain 1625 1858 IPR046341 -
Vian7g00457 1858 Pfam SET domain 1727 1834 IPR001214 GO:0005515
Vian7g00457 1858 ProSiteProfiles Post-SET domain profile. 1842 1858 IPR003616 -
Vian7g00457 1858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1503 1617 IPR013083 -
Vian7g00457 1858 Pfam PHD-zinc-finger like domain 1522 1597 - -
Vian7g00457 1858 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 533 1858 - -
Vian7g00457 1858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1345 1413 IPR013083 -
Vian7g00457 1858 SUPERFAMILY SET domain 1676 1854 IPR046341 -
Vian7g00457 1858 CDD SET_SETD1-like 1716 1854 - -
Vian7g00457 1858 ProSiteProfiles Extended PHD (ePHD) domain profile. 1503 1617 IPR034732 -
Vian7g00457 1858 Pfam PHD-finger 1372 1406 - -
Vian7g00457 1858 SMART PHD_3 1561 1617 IPR001965 -
Vian7g00457 1858 SMART PHD_3 1359 1406 IPR001965 -
Vian7g00457 1858 CDD ePHD 1524 1607 - -
Vian7g00457 1858 ProSiteProfiles SET domain profile. 1714 1835 IPR001214 GO:0005515
Vian7g00457 1858 SMART PostSET_3 1842 1858 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00457 Vian-Chr7 11644641 11659237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00457 1716 1854 C2H2 Transcription Factor Family AT2G23740 33.962 1.31e-16 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian7g00457 SET 9.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00457 - - gmx:100816713 2772.65