Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00453 ATGCTCCCAAAGCCCATGGCCGCATCGTCGTTGTCCCACCCCCAAACCTGTCACGCCTCCCACCCCCGCAACCCTAACCCCACCACCAATCAGAACCGCCACCGGACGCCATCTCGCTCCGCCACGGGAAGCGATCTGGACGCGATCCTTCTCCGCCATCGGTCGCGATCTTGCTCCGCCACCGGACGAGATCTGGACGCGATCTCGCAACACCACCGGACGCAATCTGGACACGATCTGGTTCCGCCACCAGACGCGATCTGGCTCCGCCACGGACGCGATCTCTCTCCTCCACCGAACGCGATCTGGCTCCGCCACGGACGCGATCTCTCTCCTCGTCGAACTGGCGCCGCTTCCTTGCTCTCATCTCCGCCCCCCAAGCTCGACAAAGAAACAGTTGAGGGAGATGAAGCTTTGGAGATGAAGCTTGTGGGTAAGGAAGCTGATGGACATCTTTGTGACATTGTTCTTGCCATTTTTTACTTCACAGAAATAGGGCAATGCCATTTTGTCATGAGTCGTGATAGTCTAGGAGGACATCTTTTGCATGTTTTTCTGGATTCAACTGCTGCTTCGCTTTTGAAACCCTTCTTCCCCGAAATCATTTTTCCTCGTGCATCAAATTCTTGCTCCATTGAGCTCACCGTTCGGTTTGACATTGAAATCGTTGTTCGGTTTGCCATTAAAATCCCTAAGTACAGTGTTAGGAGCTTGAAGGCTTTCGTTGACGAGGGATTTGACCGTGAGAAGAACCAGAACCAGATCGCTTCTGCTTCAACAAATGGTCTCCAGCATTTAACTCCTTTGTTTGAAGAGATAGTAAAGTTAGAACGAGCTCTTTTCAACATTCAGTGTGAACAACATTGGCTTGAGGCTCACCCAGAACGCCAGGCAATAGAATACTCAAGCCAGCTGGGAGCACCAGATAAAGTCTTGTTCTATCTATGCTTGGCCATTAACTCAACGTCCACCTCCTCCTTCTTTGTTCCAAATATTTTCCTACTGTTGTTCACTGAGCCTTTCAACTTCTCAATCGATTCACGGCTGAAACTGAAGATTCTCTCTCGAAAGGGCGAGTCAACATCGAAGCACATGACTGCATCCAATGGGATATTTCTTACATGGCAAAACATAATTCTAAAGCTCTTCACAACCATTCATATGGACAAGGCAGCTTTACTAGAGAGTGTGATAGACCATGTCAAAGATCTAAAGAGAAAAGCCATGGATGTTAGCAGAGCTTTCACAGTTCCAACTGAAATTGATGAAGTATCAATTGACTCTGAGCAGAAATAA 1296 0.4877 MLPKPMAASSLSHPQTCHASHPRNPNPTTNQNRHRTPSRSATGSDLDAILLRHRSRSCSATGRDLDAISQHHRTQSGHDLVPPPDAIWLRHGRDLSPPPNAIWLRHGRDLSPRRTGAASLLSSPPPKLDKETVEGDEALEMKLVGKEADGHLCDIVLAIFYFTEIGQCHFVMSRDSLGGHLLHVFLDSTAASLLKPFFPEIIFPRASNSCSIELTVRFDIEIVVRFAIKIPKYSVRSLKAFVDEGFDREKNQNQIASASTNGLQHLTPLFEEIVKLERALFNIQCEQHWLEAHPERQAIEYSSQLGAPDKVLFYLCLAINSTSTSSFFVPNIFLLLFTEPFNFSIDSRLKLKILSRKGESTSKHMTASNGIFLTWQNIILKLFTTIHMDKAALLESVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDSEQK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00453 431 PANTHER TRANSCRIPTION FACTOR BHLH30 385 429 IPR045847 GO:0003700|GO:0006355
Vian7g00453 431 MobiDBLite consensus disorder prediction 1 46 - -
Vian7g00453 431 MobiDBLite consensus disorder prediction 9 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00453 Vian-Chr7 11551211 11562177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00453 384 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 44.444 4.11e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00453 - - gmx:100799687 73.559