Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00450 ATGGGGAAGCCGGCGGGTAAAAAGAAAGATCATGAGATTCCCGCTCCCACGACGAGGGCGAACGGTCACCACCAGCCGACAAAATCATGGGAGGAGAAACGAGGGGCGGCGGCGGCGGCTGCGTCGTCGTCGGCGGCGACGTCGAAGGTGCTGGACGAGGACACGGCGATGTTCATAAACATGTCGCATGAGCTTCGAGAGGAAGGGAACCGGTTGTTTCAAAGGAAGGACCACGAGGGAGCGATGTTGAAGTACGAAAAGGCTCTGAAGCTTCTGCCGCGGAACCACATCGACATGGCGCACCTCCACACCAGCATGGCCATCTGCTACATGCAGCTGGGACTGGGCGAGTACCCGCGCGCCATCAGCGAGTGCAACATGGCGCTGCAGGTGTCGCCGCGCTACACCAAGGCGCTGCTGAAGCGGGCCAAGTGCTACGAGGCGCTGAACCGCTTGGACCTGGCGATGCGGGACGTGCGCGTGGTTCTGAATTTGGAGCCCAATAATTCGACGGCGCTGGAGGTTTTGGATAGCTTGAGGGAGACGATGGAGGAGAAGGGGATTGTGCTTGATGAGACGGAGATAGCCCTCGCGGCGCTTCAGCAGCATCCGGAGCCGCCGTCTGCGCGGCTGAGGAAGGTGGTGAGGGAGAAGATCAAGAAGAATAAGAAGGAAAACAAGGGGGAGGATGAGGGGAAGGCGAAGAAGATTATCGTTGAAGAGAAGGTTAAGGCTGATAATGTTAGGAAAAAGGACAAAGAGAAATCGGGGAAAGTGGAGAAGGGAAAATTGGGCAAGGAAGATAAAGGGAAATTGGCGAAGGAAGACAAAGGGAAACTGGGGAAAGAAGAGAAAGAGAATTTGGGGAAGGAAGAAAAAGAGAAATTGGGGAAAGAAGAAAAAGGGGTTGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGATGGGCGCAATTGCCTGTGAATTGTGGAATTAGGTTGGTGAGGGATGTGATAAGGGATAAGTTTCCGGGGTTGAAGGGTGTTCTTGTGAAGTATAAGGACAGGGAGGGTGATTTGGTTACTATAACTAATACTTCTGAATTGAGGCTGGCTGAAACTTGTCATGTTCTTGGGTCGATTCGGCTTTATGTGACCAAGGTTGAGCCGGAAGAGGAGCCATTTTATGATGATGGGGTTGTGGCGGATGGTGAAAAGGTGAAGGCGGTTGAGAATGGGAATGGAGGTGTGGGGAAGGGGAGGAGTAGTACTGTGGAGGATTGGCTTGTGCAGTTTGCTAGGTTGTTTAAGAATCATGTTGGATTTGATTCAGATGCGTATTTGGATATTCATGGGATTGGGATGAAGTTGTATTCGGAGGCCATGGAGGATGCAGTGACAAGTGAGGCTGCTCAGGAACTGTTTGAGATTGCTGCAGATAGGTTTCAGGAGATGGCGGCTTTAGCTTTGTTCAATTGGGGGAGTGTGCATATGTCAAGGGCTAGGAAGAGGGTGAGTCTTACGGAGGATGGATCGAGGGATTCTTCGTTTGAGTGTATTCAAGCTGCTTATGAATGGGCTCAGAAGGAGTATATGAAAGCAGAGAAGAGATTTGGAGAGGCTGTTAGGATCAAACCAGATTTTTATGAAGGGCTTCTTGCTCTAGGGCATCAGCAATTTGAGCAAGCAAGGCTGTGCTGGTGTTATTTGACTGCAACCGAGAAGGATTTAGAAGTCAGCCATTCGGATGAGGTTGTGGAGCTCTTTAACAAGGCTGAGGACAATATGGAGAAAGGCATGATGATGTGGGAGGAGATGGAGGAGCGGCGATTGAATGGACTGTCCAAAACGGATAAGTTTAAAGAGCAGCTAGAGAAAATGGGGTTGCATGGTCTTTTCAGGGATGTTTCTGCTGATGAAGCTGATGAACAGGCTGCAAGGATGAGGTTGCAAATATATCTTTTATGGGGCACTTTGTTGTATGAGCGTTCTGTTGTGGAGTATAAGCTAGGCCTGCCAACATGGGAAGAATGTGTAGAGGTTGCAGTTGAAAAATTTGAACTGGCTGGAGCTTCAACAACTGATATTGGGGTCATGATAAAGAATCATTGTTCTAATGAAACGGCAATGGAAGGGTTCAAAATTGATGAGATAGTGCAAGCTTGGAATGAGATGTATGATGGTTGGCAGTTTGATGTTCCATCATTTCGACTTGAACCACTGTTCCGTCGGCGGGTTCCAAAACTCCATTACATCCTGGAGCAATTTTGA 2256 0.4925 MGKPAGKKKDHEIPAPTTRANGHHQPTKSWEEKRGAAAAAASSSAATSKVLDEDTAMFINMSHELREEGNRLFQRKDHEGAMLKYEKALKLLPRNHIDMAHLHTSMAICYMQLGLGEYPRAISECNMALQVSPRYTKALLKRAKCYEALNRLDLAMRDVRVVLNLEPNNSTALEVLDSLRETMEEKGIVLDETEIALAALQQHPEPPSARLRKVVREKIKKNKKENKGEDEGKAKKIIVEEKVKADNVRKKDKEKSGKVEKGKLGKEDKGKLAKEDKGKLGKEEKENLGKEEKEKLGKEEKGVVTRTVKLIYGEDIRWAQLPVNCGIRLVRDVIRDKFPGLKGVLVKYKDREGDLVTITNTSELRLAETCHVLGSIRLYVTKVEPEEEPFYDDGVVADGEKVKAVENGNGGVGKGRSSTVEDWLVQFARLFKNHVGFDSDAYLDIHGIGMKLYSEAMEDAVTSEAAQELFEIAADRFQEMAALALFNWGSVHMSRARKRVSLTEDGSRDSSFECIQAAYEWAQKEYMKAEKRFGEAVRIKPDFYEGLLALGHQQFEQARLCWCYLTATEKDLEVSHSDEVVELFNKAEDNMEKGMMMWEEMEERRLNGLSKTDKFKEQLEKMGLHGLFRDVSADEADEQAARMRLQIYLLWGTLLYERSVVEYKLGLPTWEECVEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKLHYILEQF 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00450 751 SMART PB1_new 305 383 IPR000270 GO:0005515
Vian7g00450 751 ProSiteProfiles TPR repeat profile. 62 95 IPR019734 GO:0005515
Vian7g00450 751 MobiDBLite consensus disorder prediction 1 17 - -
Vian7g00450 751 SUPERFAMILY TPR-like 57 181 IPR011990 GO:0005515
Vian7g00450 751 Gene3D - 298 382 - -
Vian7g00450 751 MobiDBLite consensus disorder prediction 249 297 - -
Vian7g00450 751 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Vian7g00450 751 ProSiteProfiles PB1 domain profile. 305 383 IPR000270 GO:0005515
Vian7g00450 751 SMART tpr_5 136 169 IPR019734 GO:0005515
Vian7g00450 751 SMART tpr_5 62 95 IPR019734 GO:0005515
Vian7g00450 751 SMART tpr_5 510 543 IPR019734 GO:0005515
Vian7g00450 751 SMART tpr_5 100 135 IPR019734 GO:0005515
Vian7g00450 751 CDD PB1 307 380 - -
Vian7g00450 751 Gene3D Tetratricopeptide repeat domain 55 197 IPR011990 GO:0005515
Vian7g00450 751 SUPERFAMILY CAD & PB1 domains 305 391 - -
Vian7g00450 751 PANTHER PROTEIN CLMP1 1 749 IPR044517 -
Vian7g00450 751 MobiDBLite consensus disorder prediction 1 45 - -
Vian7g00450 751 Pfam PB1 domain 305 381 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00450 Vian-Chr7 11495635 11497989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00450 52 185 Calmodulin-binding Proteins AT3G25230 28.671 1.49e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00450 K26538 - zju:107421160 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00450 7 11495635 11497989 Vian4g01997 4 36620907 36623271 PCT