Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00445 ATGAGCATGCATAGCCCTGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGATAGAGGTATACCTTACAAAGAAATCAATAGAACAAGCAGTTTCTCTTGCTTATCCGGTGCTGCCTTAAGTGCAAATGCTACACTTCCCAACACAAATATCTGCAATGGCGTAATAGGAGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGAACAATACCCTCTTCATCAAGTTTTCCAAAATTGGAAATATTATCATCTTCTGTCCATAGTAGTTTTTCAAATCTAAGTTGCAGCCCTTCCACTCCAACTAACATGCTTGAATATGACTCATGTTCATTAAAATCTATGAGTGCTTCTTCTAGAACTGAAGGTTTTCTTAATGCCATGGATGTTCAAGTTGCTGGAGGAGCGGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCTATTTATGATGGCTTTAATGGGAGAGATGCAGCCGACTTTTTGGCGGGTACCCTTTATGATACCATTGTATCTTATTTTAATATGTTACGTTGTGATTTGGAACCACATTTCATAAAAGCTTCTGACAATGTGGCTGTGGGTGAATCCTTTTCATATAATTTGGATGATAGTCTTATTCTTCTGGAGCACCAATCTCCTTCAAAATTTAAGGGAAACAATTCTGGTCTTGACTGTTTGGCAAACATTATTCCACCTTCCAAGTCAGAAGCATCTCCTAAATCATTTTCACATAGTAAAGTACTTGATGGTCTCCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCTTATGCATGGTTGAACAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGCAATGATTTATATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCGACATGCTGTACAGATAACAGAATGAATGGGAATGAGAGATTGAAGGCTATCCAGCTCACAGATTGTCATACAGTTGACAATGAAGCCGAAAGAGCTCGAGTTCTTGCTGATCATCCTGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAGGGAAAACTGAAGGTTACTCGAGCTTTAGGAGCAGGGTACTTGAAAAAGAAAATTCTGAATGACGCATTAATGGGAATCCTTCGAGTTCATGATCTCACTAGCCCACCATATATTTCAACTGATCCATCGTTGAATGTGCACAAAATCTCAGATTCTGACCAATTTGTTATAGTTGCGAGTGATGGTTTATTTGACTTCTTCAGTAATGATGAAGCAGTACAGTTTGTAGAGTCTTATATATTGAGAAATCCTTTTGGTGATGCAGCAAAATTTCTTATTGAGCAATTAGTTGCAAGAGCAGCTGATTCTGCAGGCTTCAGCACGGAGGAGTTGATGAATGTTCCCGACGGGAGGAGGAGGAAGTACCATGATGATGTGACGGTAATGGTGATCATCCTTGGCATGAATCAACGGACTTCAAAAGCATCAATTTGCACCTAG 1554 0.3951 MSMHSPEGELKISFGYQCNSDRGIPYKEINRTSSFSCLSGAALSANATLPNTNICNGVIGEEILPSLDSPKSFRTIPSSSSFPKLEILSSSVHSSFSNLSCSPSTPTNMLEYDSCSLKSMSASSRTEGFLNAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIVSYFNMLRCDLEPHFIKASDNVAVGESFSYNLDDSLILLEHQSPSKFKGNNSGLDCLANIIPPSKSEASPKSFSHSKVLDGLQHVLSQVENDFLCMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCCTDNRMNGNERLKAIQLTDCHTVDNEAERARVLADHPDDPKTIVAGKVKGKLKVTRALGAGYLKKKILNDALMGILRVHDLTSPPYISTDPSLNVHKISDSDQFVIVASDGLFDFFSNDEAVQFVESYILRNPFGDAAKFLIEQLVARAADSAGFSTEELMNVPDGRRRKYHDDVTVMVIILGMNQRTSKASICT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00445 517 Gene3D - 98 513 IPR036457 -
Vian7g00445 517 SUPERFAMILY PP2C-like 142 505 IPR036457 -
Vian7g00445 517 CDD PP2Cc 142 504 IPR001932 -
Vian7g00445 517 Pfam Protein phosphatase 2C 269 471 IPR001932 -
Vian7g00445 517 SMART PP2C_4 120 502 IPR001932 -
Vian7g00445 517 ProSiteProfiles PPM-type phosphatase domain profile. 129 504 IPR001932 -
Vian7g00445 517 PANTHER PROTEIN PHOSPHATASE 2C 137 502 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00445 Vian-Chr7 11441561 11443442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00445 6 514 PP2C-type Phosphatase Gene Family AT3G16560 61.450 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00445 - - gmx:100791404 868.226