Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00429 ATGTCTAAAGAAGTTGTTGATGATCCTTCAGCTGCTCCTTTTGAGTTTGAGATCTTGGATAGTGATTCTTACATTGTTAGATCTGTTAGAGCCTCAACCAATCGTGCAAATCCATGGATTGAACCTGAAAGGCTGAAACTTAGACACAGAATTGGTAGAGGCATCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTACGATGAGTACCATGAAGTTGCTGCTAAGATGTTACATTCAATTGGAGAGGATCACATGATGACTGTTATAGAAAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATGTCCTGGCTGCATGGAATTTCCATCTTAGAAGGAAGGATATGCATCATTATGAATTTCTACGTGGGTTCAATTGGTGACAAGATGGCAGGACTCAAAGAAGGAGGGATTTCATTGCATGATGTTTTAAGGTATGGAGTCAATCTGGCTCAAGCTGTTCTGGAACTTCACTCTCTAGGGATCTTCATTCTTAACCTTAAACCATTCAATGTTATTCTCAATGAGAACGATCAAGCAATTTTAGGAGATTTTGGAATTCCTAGTCTTTTGCTTGAATCCTCATTCTTAAGCACAGGTATGGATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCTGAGGTCAGAGGTCCTATATCATTTGAAACAGATTCTTGGGGGTTTGGTTGTACCATTGTCGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTCCCAGAATATACCAGTCAGTTGTTGAAAAGCATGAAAAACCCAATATTCCCAGTGGCCTTCCTTCTTCAGTTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTGGACATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAATTGGCCAATGATGGAGAATGGAGATATCTGGGAAATGTGAAAGTTAATCCAAAATCAGATAGCACTGGCTACACAGAGTGGTTCCTTTCAAAGGATCATCTTCAGGTGGGTGACATGGTCCGAACTAGAAAGCTTCCCAATTCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTTGTCAGTTTAGAGTCTAACACAGATCACAGGTTCGCCCTTGTGAGGGTCCATGGCAATGAAGACCCTATCAGAATTCATGTATCATCCCTTGAACGTGTCACGTCTGGATTGGTAGCTGGTGATTGGGTATGTTTGAGGGAAGAAAACGAGAAGCACTCACATGTGGGCATTCTACATGCCATCAACCGTGACGGTAGTGTATCTGTTGGATTTCTTGGGCTGCAAGCTCTCTGGGACGGAACCTCTTCTGATGTGGAAAAGGTGGAACCTTTCTGTGTTGGCCAGTTTGTGAGACTCAAAGACACCGTTTCGTGTCCTCGATTTGAGTGGCGGCGCAAAAGGGGCGGCGCCTGGGCTGCTGGCAGGATCTCATGGATTCTTCCGAATGGAGGTTTGGTTGTGAAGTTCCCAGGGATTATTCCTTTTGGCAATGAATCAAACACCTACTTGGCTGATCCCTCTGAGGTTGAAGTGGTCGAGTTCAGGACTTGTCCAGGGATCATAGAAAAGTATGAACATTTAGAGGATCATCACTGGGCAATTAGACCAGTTCTGGTTGCATTTGGTCTATTCACTGCTTTCAAATTTGGCATACTTGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTCAATGCAGTAGAAATTGAAAGTCATTATCAGAATGCCAATTCTGCTACAACAACTTCTACCACCACAATGAGATCTTCAAATGCTGCAAAACAAGGCAATGGAACATGGGTTCCTTCAGTTGCAAGTATAATTTTTAAGGAAGTTGGTAACTCATCCAACAGTCGGTAG 1926 0.4268 MSKEVVDDPSAAPFEFEILDSDSYIVRSVRASTNRANPWIEPERLKLRHRIGRGIFGDVWLATHHQSTEDYDEYHEVAAKMLHSIGEDHMMTVIEKFNELYFKCQGVASMSWLHGISILEGRICIIMNFYVGSIGDKMAGLKEGGISLHDVLRYGVNLAQAVLELHSLGIFILNLKPFNVILNENDQAILGDFGIPSLLLESSFLSTGMDKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVPRIYQSVVEKHEKPNIPSGLPSSVENILSGCFEYDLRNRPLMVDILSVFQSALNELANDGEWRYLGNVKVNPKSDSTGYTEWFLSKDHLQVGDMVRTRKLPNSCRPQNMDIPEGTVVSLESNTDHRFALVRVHGNEDPIRIHVSSLERVTSGLVAGDWVCLREENEKHSHVGILHAINRDGSVSVGFLGLQALWDGTSSDVEKVEPFCVGQFVRLKDTVSCPRFEWRRKRGGAWAAGRISWILPNGGLVVKFPGIIPFGNESNTYLADPSEVEVVEFRTCPGIIEKYEHLEDHHWAIRPVLVAFGLFTAFKFGILVGKKVRRNNKVNAVEIESHYQNANSATTTSTTTMRSSNAAKQGNGTWVPSVASIIFKEVGNSSNSR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00429 641 PANTHER OS06G0639500 PROTEIN 1 636 - -
Vian7g00429 641 Gene3D Transferase(Phosphotransferase) domain 1 132 336 - -
Vian7g00429 641 ProSitePatterns Protein kinases ATP-binding region signature. 51 80 IPR017441 GO:0005524
Vian7g00429 641 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00429 641 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
Vian7g00429 641 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Vian7g00429 641 MobiDBLite consensus disorder prediction 600 620 - -
Vian7g00429 641 Gene3D Phosphorylase Kinase; domain 1 23 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00429 Vian-Chr7 11163074 11166356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00429 21 316 MAP Kinase Kinase Kinase AT2G17700 24.667 2.11e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Vian7g00429 PK_Tyr_Ser-Thr 7.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00429 - - gsj:114393396 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00429 7 11163074 11166356 Vian7g00429 7 11163074 11166356 ECH
Vian4g01982 4 36438328 36441275 Vian7g00429 7 11163074 11166356 ECH
Vian7g00429 7 11163074 11166356 Vian4g01982 4 36438328 36441275 PCT