Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00410 ATGGAGGCCTCTGGTCTGCCGACGGCGGAATCCACCGCCTCAAGGATCAGTCGGCTGCTGCGCCAATCCCACTTTATTCCCGATCGGAGTCCCCTCCAACGGTGGTTTGAGACGCTACTTGAACGTGCTGGAGAGAGGTGGGTGTATGCAATTTACTGGGAGTACTCCTCTGCCACTTCCCTTCTATGTTGGCGTGACGGCTGTTTCCATGGCGAGGAGGACAACGGCAAAGCCCGCAAAGCGACGTCGTCCGAAGAACAGGACCAGCGCAATAGCGTTTTCAGATTAATCAACTCCTTAATTTTAGGCACCTCGGCTATCCCTGATGACCTCGACCAAGACATCACTGACACAGAGTGGTTCTTTTTTCTCTCCATCGCTCACAACTCCGTCAACACCAGCGGCCTGCTGGGCCAAGCTTTCTTTACTTTGAACCCAGTTTGGGCCACCGGGCCAGAACTATTATCTGAACCGGCCTGCCAACGGGCCCGGCGGTTGCATGAGTTTGGGTTTCAGACTATGGTTTGTATACAGTGGCAAAACGGCATCGTTGAGCTGGCCTTCACTGACGTGGATAATACCGAACGGATAGAAACAAATTTATTATGA 609 0.5287 MEASGLPTAESTASRISRLLRQSHFIPDRSPLQRWFETLLERAGERWVYAIYWEYSSATSLLCWRDGCFHGEEDNGKARKATSSEEQDQRNSVFRLINSLILGTSAIPDDLDQDITDTEWFFFLSIAHNSVNTSGLLGQAFFTLNPVWATGPELLSEPACQRARRLHEFGFQTMVCIQWQNGIVELAFTDVDNTERIETNLL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00410 202 PANTHER MYC 27 191 IPR045084 GO:0003700|GO:0006355
Vian7g00410 202 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 32 189 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00410 Vian-Chr7 10878370 10878978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00410 32 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 41.420 4.28e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00410 K13422 - var:108319286 416.772