Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00407 ATGGCGAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCTTTATGTACAGGAGAAATGGGAGTTGGTCCAAACACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCGGATTGTGAAAGGCTCCATTGCCCGGGGTGGTGATTTTGTCAATCGAAATGGGACCAGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCAGGCCTTCTTTCAATGCCAGTTGCTGATCGTGACACTCTTGGTTCTCATTTTATAATCACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTACTAGGTCATGATATATTGAAGAAAATTGAAGATGTGGGTGATAAAGAAGGACTTCCAAGTGTAACTGTTAAAATAATCAATTGTGGTGAACATAATGAGGATGAAAAGAAGATAAATAAATCAAAGAAGGGAAGAGATGGATCTTCTGAAACAAATAGTCATTTACTGCATAAGGGAAAGCACAGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCTGATACTTCCTCAGATTCAGAGACAACATCTTCTGAAAGTGACAGTGATTCTGATTCTGATATGTCTTCATCATCTTACACAAGTTCCTCCAGCGATGATAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAAACGTGGAAAAAAAAGAGATAAACACCGAGAAAAGAGACGGAGGAAACATGATAAAAGATCAAAGCGTAGATCAAAGAGGGAATCGCCCAGTCATACTGATTCAGATAGTGAAAGTAAGAGCAACAAAGGCTCTGATATTGAAAGTTATGGTGCCAAAGTGAATGATCAGAATCATGAAGACCATTCTCAGAGACATGCTGAAGGTCAGTCTTCCTCAGTTATCGAGAAAGAATTACCTCCAATGCACCCTAAAAAGAGGGAGAAACTGGATATATTGAAAGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCACTGGAGCCAACTATAGACCTGAAAGAAGTGAAGTGAGGCAGCCTGATGTGATGGATGATCGACCAGACAAATCTAGGAGTCAAAGCACGAGTGTTAGTCCTAGGAGGCGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAAGGAGGTTGGACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATGCTCCACTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGTGCAAGGAGGAGTCCAAGCAGAAGCGCCAGTAGAAGCCCAATGAGAGGTAGGAAAGGTAGAAGTATCAGTAGAAGCTCTGTAAGGCATCATGGACATCAAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAGAGGACTTCACCTAAAACATCATCACGAAGATCAATCAGCAGAAGCCCTACGACATCTCATGGTCGAAGAAGTGTCAGTGCAAGCCCAGGAAGATCCCCTTCTCAGAGCCAAAGAAGGAGTTTGCCCATAGCACCATCACGTCGATCAATCAGCAGAAGCCCAGTAAGAAATCACCGACTTAGAGGTGACAGTAGAAGCCCTTTAAGATCTCAAGGTCATAGAAGTGATAGTGGAAGCCCTGTAAGATCCCTCACACCGAGTCATCGAATATCACCCAGAACAAAATCTAGGAGATTAATCAGCAGAAGCCCTGTGAGAACTCGCAACTGTAAAAGTATCAACAAAGGCACCTTGAGATCTTGTGGTCGTAGAACAAGCAGTGGAAGCCCTGTAAGATCCCTTTCTCGAAGTGGCCGTAGGAGTTCACCAAGAGCATTTTCACAAAGATCAATCAGTAGAAGCCCTGTGAAAACTGGCAATCACAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCATGGTCACAGGACTGTGAGTGCTAGCCCTGTTAGATCACCTTCATGGGAGCGTCGAAAAAGTTCACCTAGAGCACCATCACGAAGATTGGTCAGTAGAAGCCCGGTAAGAGTGTCAAGAAAGAGTTTAAGCAGGAGTCCAGTTCGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCAATAGTCGGAGTCCAGTTAGAGGGCCAAGCAGAGTCCATCGTCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGTTTGTCTAGAAGTTTGTCACCTGATGTTTCCCCAAAACGTATAAGAAGGGGAAGAGGTTTTAGCGAACGATATTCTTATGCTAGAAGGTATAGGACTCCTTCTCGATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGTGAACGTGACAGATATTCAGGTTACAGAAGGTACTCCCCAAGGCGTAACAGGAGCCCGCCACCACGCAGAAGAACCCCACCAAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTTTCTCGCAGTCCACGGTACAGGGGTCGACGTCGAAGCCGTAGCCCTGTTCGCAGTCGTTCACCTGTGGGCACGTATCGACGCCGTGTTGAGAGGAGCAGGTCTTTGTCCCGGAGTAGCAGGTCTTTGTCCCGGAGCAAGAGTCCATCAGTATCCAGGGCTTCAGTGGAGTCAGAATCTCCACGAAAGAACAGCAGGTCAAGGTCCCGGTCCCAAAGCTCGGAAGGAAAGAAAGGCCTTGTATCTTACGGAGACGGTTCTCCAGATTCAAGCTGA 2820 0.4571 MAKKKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEMGVGPNTGKSLHYKGSFFHRIVKGSIARGGDFVNRNGTSGESIYGSKFPDESPRLKHDAPGLLSMPVADRDTLGSHFIITFKADPHLDRKHVVFGKLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKINKSKKGRDGSSETNSHLLHKGKHRKSSGDKRKRRKYYSSESDTSSDSETTSSESDSDSDSDMSSSSYTSSSSDDRRRKRKRSRKDKHKRGKKRDKHREKRRRKHDKRSKRRSKRESPSHTDSDSESKSNKGSDIESYGAKVNDQNHEDHSQRHAEGQSSSVIEKELPPMHPKKREKLDILKEEEFPKENGERRSNGTGANYRPERSEVRQPDVMDDRPDKSRSQSTSVSPRRRKSKSPSISPKRRLDRSPSGSRSPHAPLQRSLSQSPVRSARRSPSRSASRSPMRGRKGRSISRSSVRHHGHQSVSTSPVRPLSRSYQRTSPKTSSRRSISRSPTTSHGRRSVSASPGRSPSQSQRRSLPIAPSRRSISRSPVRNHRLRGDSRSPLRSQGHRSDSGSPVRSLTPSHRISPRTKSRRLISRSPVRTRNCKSINKGTLRSCGRRTSSGSPVRSLSRSGRRSSPRAFSQRSISRSPVKTGNHRSVSRSPLRSHGHRTVSASPVRSPSWERRKSSPRAPSRRLVSRSPVRVSRKSLSRSPVRSSARSLSRSSGRVPLRSNSRSPVRGPSRVHRRSYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSERDRYSGYRRYSPRRNRSPPPRRRTPPRFRSRRSRTPSVSRSPRYRGRRRSRSPVRSRSPVGTYRRRVERSRSLSRSSRSLSRSKSPSVSRASVESESPRKNSRSRSRSQSSEGKKGLVSYGDGSPDSS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00407 939 MobiDBLite consensus disorder prediction 481 552 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 825 865 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 606 688 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 177 939 - -
Vian7g00407 939 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 772 792 - -
Vian7g00407 939 Gene3D - 1 183 IPR029000 -
Vian7g00407 939 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Vian7g00407 939 MobiDBLite consensus disorder prediction 200 214 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 177 199 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 436 464 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 887 906 - -
Vian7g00407 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 709 745 - -
Vian7g00407 939 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 MobiDBLite consensus disorder prediction 572 591 - -
Vian7g00407 939 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Vian7g00407 939 MobiDBLite consensus disorder prediction 224 252 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 872 886 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 258 295 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 296 312 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 805 820 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 322 336 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 348 373 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 387 404 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 557 571 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 907 921 - -
Vian7g00407 939 MobiDBLite consensus disorder prediction 466 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00407 Vian-Chr7 10790955 10796958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00407 25 170 U-box Gene Family AT5G67530 37.838 2.46e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00407 K09566 - pvy:116115710 567.385