Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00404 ATGTGTAGCTATGGAGCTCAATGTAGGCATCTACCAATGCTTGGGGGTGCTTTTGCCAACCAAGTGCTCATCTTCCTCTATCAAGGAGAATTTTATAATGTTACAAAGGCGAAGTTTCTTTCTCTTCATTCCCTTTCCAACCCCAATAGTAGTCGAATGAAGGTCGACTGTAGGACTAGGCACAATGATTTGGACGGTAATGTGGCACTATGGGAGGCTATGGTGGGACGACATGAGTCAGTGAGGAAGGTGTTGGCAGAAAATGGAGCTAACTTGCAATGTGGGGATGTGGGCCAGTTTGCATGTACCGCTGTTGAGCAGAACAGTTTGAAGTTGCTGAAGGAAATAAAGCGCTACGGAGGAGATATCACCCTTCCAAGCATCAACAGTGGGACCACAGCTTTGCACGTTGTAGTGTCGGAGGGGAACGTTGAAATTGTGAAATACCTTTTGGATCACGGGGCAAGCATTGACAAGCCGGACAAGCACGGCTGGACCGCCAAAGGTCTGGCAGATCAACAATCTCATACAGAAATAAAAGCCATTTTTTACTTCACTAGGGACCCTAAGGTTCAGTCTTTCGTTACCATTCCCGAGAAGCAGAGTGGGTTCAGGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAATGGACTTCTCTATCTTCATAGTCACGATCCGCTTGTGATCCATAGAGATCTAAAATCGAGAAAGAAAGCGAAGAGAGCAATTGCAATGGCGTCGTTTGTTCAATCTATTCTGGATCCAAAGAAGAGCTGGTTCGCCGCTCAGCACATGAAATCCCTCGTCAAACGCCTCAGCAAATACGGGCTCCGATACGACGATTTGTACGATCCTTACTACGATCTGGATGTGAAGGAGGCGCTGAATCGGCTCCCGAAGGAGGTGGTGGACGCCCGCCACGCTCGTCTCAAACGCGCCATCGACCTTTCCATGAAGCACGAGTACCTCCCTGACGATCTTCAGTTGACTGACTTAGAGGATGTACAGAGTCATGATTTTGGATTAATATGGCTAGATGGCTATGCAAACACCGTTCAGGGGCTACCTTCAGGATATGCTGGCTCTTGGGAAGATGGTTTTATGACTCCTGATTTAAGTGTTAAGATATGGACAATCAACAACCAAATAGCTGCTAAAATTGTCTCTAAATGCTTTGCCACTTATGACTTGCAGGTGAAGAGGGAGAGAGCAGAACGTGAAGCATTGGGAGGTTTACCCCTATATCAACGATCTATTCCTTGA 1296 0.466 MCSYGAQCRHLPMLGGAFANQVLIFLYQGEFYNVTKAKFLSLHSLSNPNSSRMKVDCRTRHNDLDGNVALWEAMVGRHESVRKVLAENGANLQCGDVGQFACTAVEQNSLKLLKEIKRYGGDITLPSINSGTTALHVVVSEGNVEIVKYLLDHGASIDKPDKHGWTAKGLADQQSHTEIKAIFYFTRDPKVQSFVTIPEKQSGFRYRLKHKRVNIRAVKHWCRQILNGLLYLHSHDPLVIHRDLKSRKKAKRAIAMASFVQSILDPKKSWFAAQHMKSLVKRLSKYGLRYDDLYDPYYDLDVKEALNRLPKEVVDARHARLKRAIDLSMKHEYLPDDLQLTDLEDVQSHDFGLIWLDGYANTVQGLPSGYAGSWEDGFMTPDLSVKIWTINNQIAAKIVSKCFATYDLQVKRERAEREALGGLPLYQRSIP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00404 431 ProSiteProfiles Ankyrin repeat profile. 130 162 IPR002110 GO:0005515
Vian7g00404 431 PANTHER UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN 257 431 IPR003197 GO:0005750|GO:0006122
Vian7g00404 431 Pfam Ubiquinol-cytochrome C reductase complex 14kD subunit 260 346 IPR003197 GO:0005750|GO:0006122
Vian7g00404 431 FunFam Cytochrome b-c1 complex subunit 7 257 345 - -
Vian7g00404 431 Gene3D - 40 184 IPR036770 -
Vian7g00404 431 Gene3D Transferase(Phosphotransferase) domain 1 188 248 - -
Vian7g00404 431 Gene3D - 252 350 IPR036544 GO:0005750|GO:0006122
Vian7g00404 431 SUPERFAMILY 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 252 346 IPR036544 GO:0005750|GO:0006122
Vian7g00404 431 ProSiteProfiles Ankyrin repeat region circular profile. 130 162 - -
Vian7g00404 431 SUPERFAMILY Ankyrin repeat 60 179 IPR036770 -
Vian7g00404 431 Pfam Ankyrin repeats (3 copies) 104 173 IPR002110 GO:0005515
Vian7g00404 431 SUPERFAMILY Protein kinase-like (PK-like) 189 246 IPR011009 -
Vian7g00404 431 SMART ANK_2a 65 94 IPR002110 GO:0005515
Vian7g00404 431 SMART ANK_2a 130 159 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00404 Vian-Chr7 10717285 10725014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00404 56 206 Ion Channels AT2G26650 50.000 6.10e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian7g00404 UCR_14kD 9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00404 K21867 - gmx:100819491 229.18