Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00403 ATGTTTGGAATGTGTGGTCATGATGATGAAAATGAAGAAGATAATGTAAGCGAGAGAGAAATCGAGGCAAGGGAAGATGGTAGCCAATACAGTCTCACAGGTGTTTTTCTTCCTTCTCTGGGTGCCACTGCTTTGACCAACGGTAGTCGGAGACAACAGCTTCGTCGTCATATCATCTTTCCATACAATCGTAATTACAGGCTATGGAACAAGTTTCTGCTAATATTGGTCTTCTACACGGCTTGGATATGTCCATTTGAATTTGGTTTTCTAGAAAAATCAAAGGGTGCCTTAGCTGTAATCGACAATGTTGTAAATGGGTTTTTTGCCATTGACATTGTACTCACCTTTTTCGTTGCTTACCTTGATAAGTCTACTTATCTATTAGTTGATGACCACAAACTCATTGCTTTGAGATACGCTAAATCTTGGTTGATTTTGGATGTCATTGCTTGCATTCCATATGAAGTTGTTCGCAGTATGTTGCCACCTAGTCTTCAGTCCTATAGTTACTTAAATATTCTCCGACTTTGGCGTCTCCATCGAGTTAGTGCCATGTTTGCAAGATTGGAAAAGGATAGAAATTATAGCTACTTTTGGGTGCGTTGTTGCAAGCTTACATGTGTTACTCTATTCTCAGTGCATGCTGCAGCATGTTTTTTCTATTTTCTTGCTGGGAGAGATGATCCAAAAGATACATGGCTTTCGATTGTTCCTACAACCATCAACCAAGATATATGGGGAAAGTACGTAGTAGCTGTATATTGGTCCATAGTCACCCTTGCATCTGTTGGCTATGGTGATCTACATCCTAGAGATACTGTCCAATATGCCTCAAATTTTGCTCATAGGAATCAATTGCCTGCTCGTTTGCAAGAACAAATATTTGCTCATTTGCTTATGAGGTATAGAGCTGATATAGAAGGAGTACAACAACAAGAGATTATTGATTCCCTTCCAAAAGCCATTCAGTCAAGCATCGCACAATACTTATTCTTTTCACTTATTGACAAAGTGTACTTATTTCATGGAGTTTCAAATGACCTACTTTTTCAAATGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAAAATGAAGCACCAACAGAATTTTATATATTCGTTACAGGAGCTGCTGATCTTATCATTCAAAATAATGGACTAGAACAGATTGTTGGAGAAGTAAGGCAAGGAGATGTAGTTGGTGAAATAGGAGTCTTGTGTTATAGGCCACAATTGTTCACAGTCCGAACCAAGCGATTGAGCCAAATCTTACGTTTGAATCGAACCACATTTATAAATCTTACTCGTTCAAATGTTGGAGATGGAACAATGATCATAAACAATTTTCTTCAACATTTACATGAAATTGGGGGTCCAATTATGGAAGAAATTTTGGCAGAAGCAGAAGGAATGTTGGCTAGGGGAAAAATGGATTTGCCAATTAGTTTATTGTTTGCAGCTAGTAGAGGTGATGATATTATGTTGAATCAATTGTTAAAGAAGGGTTCAGATCCAAACGAACCGGACAAGAATGGAAAGACAGCATTGCATATTGCAGCTTGCAAAGGAAATGACCACTGTGTACTTGTGCTTGTGGAACATGGAGCAAATCCCAACATCAAAGACCTAGAAGGAAATTCGCCACTGTGGGAAGCAATTAAGGGTGGACATGAAACTGTGACGAGAATTCTTATAGAAAATGGTGCAGAAATAACATCTCATGATGTGGTTGATTTTGCACGATTGGCTATTGAGAAAAACAACCTAGAAATTGTGAAGGAAGTTATTCAACGTAAAGGGGAAGTGACAGAATGTGATAGTAAATTGACGACACTGCTCCATGCTGCAGTGTGTGAGGGAAATACTGAAATAGTGAAGTACCTAATAGAACTAGGAGCAGACATTGATAGACAAGATGATGTTGGGTTGACTGCAAGATCCTTAGCAGAACATCAATCAACAAAAGATTCACCAAAATCATCTCAAATGATTCAAACTATTAAAGAGGAAGTGACAATGAGAGTAACACTTAGTTGTCCAGAGAAAGGTGAAGGTGCCAAGAAGCTTCTGTTTTTGCCAGATTCTATTGAAGAAATACTACATATTGGTGCTAAAAAGTTTGGTTGTTCTCCGACCAAAATATTGACCACAGAAGGAGCTCAAATCGATGACATAGATGTTATAAGAGATGGTGATCATCTTGTTCTTGCATAG 2238 0.3843 MFGMCGHDDENEEDNVSEREIEAREDGSQYSLTGVFLPSLGATALTNGSRRQQLRRHIIFPYNRNYRLWNKFLLILVFYTAWICPFEFGFLEKSKGALAVIDNVVNGFFAIDIVLTFFVAYLDKSTYLLVDDHKLIALRYAKSWLILDVIACIPYEVVRSMLPPSLQSYSYLNILRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFSVHAAACFFYFLAGRDDPKDTWLSIVPTTINQDIWGKYVVAVYWSIVTLASVGYGDLHPRDTVQYASNFAHRNQLPARLQEQIFAHLLMRYRADIEGVQQQEIIDSLPKAIQSSIAQYLFFSLIDKVYLFHGVSNDLLFQMVTEMKAEYFPPKEDVILQNEAPTEFYIFVTGAADLIIQNNGLEQIVGEVRQGDVVGEIGVLCYRPQLFTVRTKRLSQILRLNRTTFINLTRSNVGDGTMIINNFLQHLHEIGGPIMEEILAEAEGMLARGKMDLPISLLFAASRGDDIMLNQLLKKGSDPNEPDKNGKTALHIAACKGNDHCVLVLVEHGANPNIKDLEGNSPLWEAIKGGHETVTRILIENGAEITSHDVVDFARLAIEKNNLEIVKEVIQRKGEVTECDSKLTTLLHAAVCEGNTEIVKYLIELGADIDRQDDVGLTARSLAEHQSTKDSPKSSQMIQTIKEEVTMRVTLSCPEKGEGAKKLLFLPDSIEEILHIGAKKFGCSPTKILTTEGAQIDDIDVIRDGDHLVLA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00403 745 ProSiteProfiles Ankyrin repeat profile. 519 551 IPR002110 GO:0005515
Vian7g00403 745 SUPERFAMILY Ankyrin repeat 491 661 IPR036770 -
Vian7g00403 745 Gene3D Jelly Rolls 305 463 IPR014710 -
Vian7g00403 745 ProSiteProfiles Ankyrin repeat region circular profile. 616 648 - -
Vian7g00403 745 FunFam Potassium channel KAT2 329 464 - -
Vian7g00403 745 Gene3D - 68 282 - -
Vian7g00403 745 PRINTS Ankyrin repeat signature 520 535 IPR002110 GO:0005515
Vian7g00403 745 PRINTS Ankyrin repeat signature 632 646 IPR002110 GO:0005515
Vian7g00403 745 PRINTS EAG/ELK/ERG potassium channel family signature 113 122 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vian7g00403 745 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vian7g00403 745 PRINTS EAG/ELK/ERG potassium channel family signature 79 86 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vian7g00403 745 PRINTS EAG/ELK/ERG potassium channel family signature 102 112 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vian7g00403 745 CDD CAP_ED 341 446 IPR000595 -
Vian7g00403 745 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Vian7g00403 745 Pfam KHA, dimerisation domain of potassium ion channel 682 744 IPR021789 -
Vian7g00403 745 SMART cnmp_10 341 458 IPR000595 -
Vian7g00403 745 SUPERFAMILY cAMP-binding domain-like 272 461 IPR018490 -
Vian7g00403 745 SUPERFAMILY Voltage-gated potassium channels 61 274 - -
Vian7g00403 745 ProSiteProfiles Ankyrin repeat region circular profile. 519 550 - -
Vian7g00403 745 PANTHER POTASSIUM CHANNEL AKT1 272 744 IPR045319 GO:0005249|GO:0006813
Vian7g00403 745 ProSiteProfiles cAMP/cGMP binding motif profile. 341 460 IPR000595 -
Vian7g00403 745 ProSiteProfiles Ankyrin repeat region circular profile. 552 583 - -
Vian7g00403 745 Gene3D - 488 667 IPR036770 -
Vian7g00403 745 SMART ANK_2a 519 548 IPR002110 GO:0005515
Vian7g00403 745 SMART ANK_2a 552 581 IPR002110 GO:0005515
Vian7g00403 745 SMART ANK_2a 486 515 IPR002110 GO:0005515
Vian7g00403 745 SMART ANK_2a 583 612 IPR002110 GO:0005515
Vian7g00403 745 SMART ANK_2a 616 645 IPR002110 GO:0005515
Vian7g00403 745 ProSiteProfiles KHA domain profile. 682 745 IPR021789 -
Vian7g00403 745 Pfam Ion transport protein 67 273 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vian7g00403 745 Pfam Cyclic nucleotide-binding domain 361 445 IPR000595 -
Vian7g00403 745 ProSiteProfiles Ankyrin repeat profile. 616 648 IPR002110 GO:0005515
Vian7g00403 745 FunFam Potassium channel KAT3 68 283 - -
Vian7g00403 745 Pfam Ankyrin repeats (3 copies) 491 582 IPR002110 GO:0005515
Vian7g00403 745 Pfam Ankyrin repeats (3 copies) 590 647 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00403 Vian-Chr7 10707457 10714363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00403 12 664 Ion Channels AT4G32500 55.460 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00403 K21867 - gmx:100809960 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00403 7 10707457 10714363 Vian7g00403 7 10707457 10714363 ECH