Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00389 ATGGCTCAGCAAAACAATGCCGACAACAACGTTACCCAGCAACAACATCAACAGCTTGTGAACCCCATGTTCCATGACTTTCTTGGCACTAAGAGCACCAACCCCATTCACTCCAATGTGCTCTATGCCCCCCAAACCTCTCATCTTTACGTCACCCGCTCCTCCCTATCTTCCGCCACCGTGTTCAGCGGCGCTGCCACCTCCCACCTCGCTTCCGGTGAGCCGGTTCCACCCCCATTTGCTTCAAAACTCCATCTTTTCTTCTCCCCGCAAACCCCATGTGCTGCATTTTCGAGGGTCGAGTTCGGATTTCTCAGTGGAAGGCACTTGTTCACTTGTGACTTTAAAAAACAGATTGGGAATCATCTTGAGGGAGTTCCATTCTATGGTCCGAAGAGTGAATTTTGTGGCATTGAGATAGCTAACAGAGTAGTGAGAAAGAAGAGAAGTAATTCTGATACCACTTTTATCTTTTCTTCCAGAGATTCCTTCCAAATGGTCCCTCATTCCCTTCAAAACTCACATTCCATGAAGATGCTTCGGAATGCAGCTACTTCTGATTGCCTTAGAAGGTCTAATGGTGATGATGTGTTTCTTCCTATGCAGTCACTGAAGCCAACAACCAGTGGCTCTCAGATATTGCAGACTCCCACTGGAACTAAGTCTGATGCAAATAAATTGGAAAGATCAATTCTCATGAATTTTGGTCCTTTCATGCAGTTAGCTCCTCTTATGGACCAAAGAACTTCAAACAAGATGGGTGATACTAGTGCTGCTCCTTCATTTATCTCTCAGTTAGCTGCTGATGAAGGGTCTAGAACCAGAATCAAGGGTCCTGGGCTTTTCAGTTCCATTAACACAATCAATGCAGTCACTGATAAGACTTCTTCCATGCTTGGTGGCAGCAGAGCAAAGCCTGTGACAAACATAGTAGACCCTGAATCTTCCACAATTCTGAATCAACGTGGCTCATCATCTGCCACCTGTCAGATGACTATCTTTTATGGAGGTCAAGCTCATGTGTTTGATGATGTACAGCCTAATAAGGCTGATGTTATAATGGCTTTAGCTGGCTCTAATGGTGGATCTTGGACCACAGCATTCTCGTCCAAATCTTCTGTAAAGCTACACCATGATAGTAACTTGGAAAGAAATTCAAGTCATCATGCCACTGAACCAGGTGGTCAACTGACTTCCACAACAGCTGAAGATACAAGAAATTCTGGTTCAAGCTGCAAATCCTAG 1245 0.449 MAQQNNADNNVTQQQHQQLVNPMFHDFLGTKSTNPIHSNVLYAPQTSHLYVTRSSLSSATVFSGAATSHLASGEPVPPPFASKLHLFFSPQTPCAAFSRVEFGFLSGRHLFTCDFKKQIGNHLEGVPFYGPKSEFCGIEIANRVVRKKRSNSDTTFIFSSRDSFQMVPHSLQNSHSMKMLRNAATSDCLRRSNGDDVFLPMQSLKPTTSGSQILQTPTGTKSDANKLERSILMNFGPFMQLAPLMDQRTSNKMGDTSAAPSFISQLAADEGSRTRIKGPGLFSSINTINAVTDKTSSMLGGSRAKPVTNIVDPESSTILNQRGSSSATCQMTIFYGGQAHVFDDVQPNKADVIMALAGSNGGSWTTAFSSKSSVKLHHDSNLERNSSHHATEPGGQLTSTTAEDTRNSGSSCKS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00389 414 ProSiteProfiles Tify domain profile. 324 359 IPR010399 -
Vian7g00389 414 Pfam tify domain 326 358 IPR010399 -
Vian7g00389 414 SMART tify_2 324 359 IPR010399 -
Vian7g00389 414 MobiDBLite consensus disorder prediction 387 414 - -
Vian7g00389 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 242 390 IPR040390 -
Vian7g00389 414 MobiDBLite consensus disorder prediction 375 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00389 Vian-Chr7 10459750 10463293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00389 120 357 Tify Gene Family AT4G32570 35.294 1.20e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vian7g00389 tify 5.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00389 - - ahf:112707837 334.724