Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00339 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATCGATGATCAAAAGGCCATCCAAGAGGCTGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACCGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCCCTCCTCAACCGAACCGGCCACGCCCGCTTCAGACGTGCTCCGCTTCAGGTTAACCCCCCTGAACCGGTTCAAACCCCCGAGCCTGTTCAAACCCCCGCACCGGCTCACAATCCTCCCTCTGCACCACTCCATCTTCCTCCCCCGCAAACCGCCAACCTCTCTCTGCCGGCGCTCTTCGCGTCGCCGGCGCCGGTTCACCATGCCTCGGGGAGCGTCACGCTCGACTTCACCAAGCCGCACAACGCGCTCCGGAACTCCAAGGCGAAGTCCGTGGAACTCGAGTTCTCCAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCTTGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCGCCTCCGCCTCCCGCGACCTCCGCCGGGAAACCGCCGGCGTTCAAGAAACGCTGCCTCGAACACCGCGAACACTCCGACGACGTCTCCGGATCCGGCAAGTGCCACTGCGTCAAGCGAAGTAATCACGTGAGTGGGGTAAGGCAGCGTTTGGGAGTCAACGATTTGGGCAGTGGTGCAGTTAAATGCATTAATAGGAAAAATAGGGTGAAGAAGACCGTGAGAGTGCCGGCGATAAGTTCAAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGCTCACCGTACCCTCGGGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCAAGGAAACACGTGGAGCGTGCACCAGACGATCCGGCGATGCTGATAGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 1062 0.5979 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPLQVNPPEPVQTPEPVQTPAPAHNPPSAPLHLPPPQTANLSLPALFASPAPVHHASGSVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFLSSAITGDGSVSNGKIFLAPPPPPPATSAGKPPAFKKRCLEHREHSDDVSGSGKCHCVKRSNHVSGVRQRLGVNDLGSGAVKCINRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00339 353 MobiDBLite consensus disorder prediction 78 102 - -
Vian7g00339 353 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00339 353 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00339 353 Gene3D WRKY domain 263 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g00339 353 MobiDBLite consensus disorder prediction 69 102 - -
Vian7g00339 353 FunFam WRKY transcription factor 65 258 335 - -
Vian7g00339 353 Pfam Plant zinc cluster domain 252 272 IPR018872 -
Vian7g00339 353 SUPERFAMILY WRKY DNA-binding domain 272 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g00339 353 Pfam WRKY DNA -binding domain 276 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00339 353 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 338 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00339 Vian-Chr7 9509822 9512124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00339 1 352 WRKY Transcription Factor Family AT2G24570 56.334 7.97e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian7g00339 WRKY 9.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00339 - - pvu:PHAVU_001G060200g 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00339 7 9509822 9512124 Vian7g00339 7 9509822 9512124 ECH