Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00331 ATGGAAGAAGGCAGTCATGAGAAGAAGAAGGAAGAAACCCTACCACCTGGTTTTCGGTTTCACCCCACAGATGAAGAACTCATTTGTTACTATCTCACAAACAAGATTTCAGATTCTGATTTTACAGCAAAAGCAATAGCTGTTGTAGATCTCAACAAATGTGAGCCATGGGATCTTCCTGGAAAGGCGAAAATGGGACAAAAAGAATGGTACTTCTTCAACCTAAGGGATCGTAAATATCCAACAGGTGTGAGAACAAACAGAGCAACGAACACAGGGTACTGGAAAACCACTGGAAAAGACAAAGAGATCTTGAACAGTGTTACATCGGAGTTGGTCGGTATGAAGAAGACTTTGGTTTTCTACAAAGGTAGGGCTCCCAGAGGAGAGAAAACCAACTGGGTCATGCATGAGTATCGCATTCATTCAAAATCCACCTTCAAAATCACTAAGCAAGATGAATGGGTGGTTTGCCGGGTGTTCCGGAAGAGTGGTGGTGCAAAAAAGTTCCCCTCAAATTCAAACCACAGCAGAACAGTGAACCCTTATGGTGTGGAAGTTAGCCCTAGCGTTGTGCCACCTCCAATGATGCATCTGGGTGACCCTTCTGCTCATTTCAATTTCCTTTATGGATCAAGAAACTACATGATGAATCCTTCAGAGTTCAGAGCAACAGTTTCCATGGCTGCCACCGCACACACACAGCCCCTTCTGAGGCCAATGATGGCACCACCACAGCCACTTTCTGCTCACACAGTGGCCCAAATGAATCATGATTTCAGTTCCAACATGGTGACACCTGCTGCTCTTGCTGCTCACAGTGTAGACTATGGTGCAGACATGACCAATGCAAATTCTCATGGCAATAGGTTCATGGGCATGGACCACTGCATGGATCTTGACAGTTACTGGCCTTCCTACTGA 924 0.4535 MEEGSHEKKKEETLPPGFRFHPTDEELICYYLTNKISDSDFTAKAIAVVDLNKCEPWDLPGKAKMGQKEWYFFNLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTFKITKQDEWVVCRVFRKSGGAKKFPSNSNHSRTVNPYGVEVSPSVVPPPMMHLGDPSAHFNFLYGSRNYMMNPSEFRATVSMAATAHTQPLLRPMMAPPQPLSAHTVAQMNHDFSSNMVTPAALAAHSVDYGADMTNANSHGNRFMGMDHCMDLDSYWPSY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00331 307 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Vian7g00331 307 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Vian7g00331 307 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Vian7g00331 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 241 - -
Vian7g00331 307 FunFam NAC domain-containing protein 100-like 23 167 - -
Vian7g00331 307 Gene3D NAC domain 23 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00331 Vian-Chr7 9346509 9348942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00331 1 307 NAC Transcription Factor Family AT2G24430 51.488 9.39e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian7g00331 NAM 1.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00331 - - pvu:PHAVU_001G059900g 522.316