Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00326 ATGGACAGTGACCGGAGCGTGTCTGCTCCATCTCATGGGCAAGTTGACGGCACTCAGAGAGTTAAAGCATTACATGGGAGGACTACTGGCCCTACAAGGCGTTCTACAAAAGGGCAATGGACACTAGAGGAGGATGACATCTTACGGAAGGCAGTTGAGAAATTTAAGGGAAAGAATTGGAAAAAAATTGCGGAATGTTTCAAGGATAGGACTGATGTGCAATGCCTGCATAGGTGGCAAAAGGTTTTAAATCCTGAACTTGTTAAAGGTCCATGGTCTAAAGAGGAAGATGACATAATTATTGAATTGGTGAATAAAAATGGGGCTAAAAAGTGGTCATCTCTTGCACGACATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTTGCTATCTTCCCCATTGAGTTGCACTTGGCTGGTGTGCTTGGCATGTATGGGCACCACGACCAATTCTGGGCAAATGGTCTGCAGAATCTTTGATCACTTCACTAGTGTTGCTTCATCAATGTGGGTTAATCATCTTGATCCTACTATAAAAAAGGAAGCATGGACTCAGGAAGAGGAGTTGGCTCTAATACATTATCATCAGATATTTGGGAACAAATGGGCCGAGTTGTCAAAGTACATTCCTGGAAGGACAGACAATGCTATTAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTATTTGACATCTGGTGTGCTTAATCAGTTTGAGCCTGTACCTCATGTTGGAAATTCAAATCAATCAACAAGGTTGCAGTGTAGTGGAGATGATAACTGTTCCAAAGGGATTAAAAGAGAAGAGATTTCGGAGTCCAGCCAAGGTTCAGCTAATGCTGTTTGCTTTCCGTCTGCTAGAGGAATGAGCAGTACTGAATTACAAACTGGAGAGGCGACTTGTAGGCCAAATGAAGAATGTAATCTTCGAAAGGATCATAGTCCAAGTCAAGCATCTTATTCAGAGCCATATTATGTATCAATTGATGATGTTAGTATATGCATTCCTGAAATTTCTCACCAAGAGGCATGCACTTCTCAGTTCATTGAGCAACAATCACATGAACTGGGAAATTCCATAACTGGGGATCGTCATTTCAATTTACATTCCTTACCCAATGTTTCATCAATGGTCGTGGGGCAGGATTCCTCACAGTTGCATAGAGATTGTGTAGCTTCTAGTGAAATCTGTGACATGGTAAATGTTCCATTTCGGCCTTCAAAGGCGTTGGGTGCTTCAACTTCCATGGTGCCTGCATCTTTGGGTTCTCTTAAACCAGAGCATGTGTTGATATCTGATGATGAATGTTGCAGAGTTCTGTTTTCAGATTCAATAAATGATGGGTCTTTTCCCCCTGTAGATTATATTAAAGGTGAAGAAACAGTTAAATTTTCTGGATGTACTTCATTTCGTTGCCAATCTTGTAATATCCAGATATCTGAAACTGGTGGATCCTCAACTCCTCATCTAACTTGTCCTCGGTGTTCTAATAATTATCAAGGAACTTCATCCTCCCTGTCTAATCCTCCAGTACTTTCTGCACGTGATGATAGGGAGGGGCCAACTGCCAATGACAATCATTTATATGGGGAAGACGGTCAGCAGTTGGTCTCCACAGCACCTGCTAACCTCACTCATGTCAATTACATATCCAGTTCTCCCTGTGTGGATGGTATGGGTACTGTAGTAATGGAAGAACCACGTGAGGAAAACACAAATGTGCATACAGAAAAGGAGGACTCAGGATCTCTATGTTATGAACCTCCCCGTTTTCCAAGTTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGAGTGATATGCAGCAAGAGTTTAGTCCCTTGGGAATCCGCCAATTTATGATGTCTTCTATGAATTGTCTTACTCCTTTTAAGTTGTGGGACTCACCCTCTCATGGTGATAGTCCTGATGCATTGTTAAAAAGTGCTGCTAAAACTTTTACAGGTACACCATCCATATTAAAGAAACGGCACCGAGATTTGTTGTCACCACTCTCAGATAAAAGAGTTGAAAAGAAACTTGGGACTGACATGACTACCTTCACCAACAACATTTGCAGTTTGGATGTCATGTTCGATGACAATGAGACTCAGGAAACGGATATCCCTTCATTGCAAAAACAGAACAGTAGTGCATGTGTTGATGATGATAATAAAGAAAATTGCGGACAAGCTTATAAGCCAACTAAGTATGGAATTATCGATGAAAAGAACTCCTATAAAGATACTGTAGACAATTCTCAGCCTAATGTGAATCAACAGCGGCTAATGGTTGATGCCTCAGCTGCTGCCATTGAACAAGAACCTTCTGGAGTTTTGGTCGAACATGATGTGAATGACTTGACGCTGTCTCCTGATCAAGTTGGTTTAAAATCAAACAGAGGTCTTGTTACAAGTACTAAAACACCCAAAAGCATGAACAGAACCTTGGAAGAAGTTCCCAATCAGAACGGCCATTTGAAATTATCTTCTAAAAATCCATGCTCAAGGATTAATTCTAATTCTCCTTGTGTTCGTGCAAAGGAGCATGAAAACCTTTCTGTTGCTGTTACTCGTGTACAAGCTCCAGCGGACAATTCAGGGGAACAAACCAGAAAGGATGGTGGTTTTGAAACATGTAGCATATTTGGTGGAACACCTTTTAGGAAAGGCCTTGAATCACCTTCCGCATGGAAATCTCCTTGGTTTTTCAACGCTTTTCTATCTAGCCCCAGACTTGATAACGAACTTACAGTTGAGAAAGATGCATCTGGAAACGACAAGGATAACTGCCATGGTTCTCCCAATCAGCCTGGGAACCATTCTCAATTGGCTTCAAATGCATTGATAGAGCGACGTACACTTGACTTTAGCGAATGTGGAACACCAAGCAAGGGTGATGACAACAAATCCTCAGCTATAAGTTCCAAAAGCCCTTCTTCGTATCTGTTGAAAGGTTGTAGATGA 2988 0.4143 MDSDRSVSAPSHGQVDGTQRVKALHGRTTGPTRRSTKGQWTLEEDDILRKAVEKFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDIIIELVNKNGAKKWSSLARHLPGRIGKQCRERLLSSPLSCTWLVCLACMGTTTNSGQMVCRIFDHFTSVASSMWVNHLDPTIKKEAWTQEEELALIHYHQIFGNKWAELSKYIPGRTDNAIKNHWNSSVKKKLDSYLTSGVLNQFEPVPHVGNSNQSTRLQCSGDDNCSKGIKREEISESSQGSANAVCFPSARGMSSTELQTGEATCRPNEECNLRKDHSPSQASYSEPYYVSIDDVSICIPEISHQEACTSQFIEQQSHELGNSITGDRHFNLHSLPNVSSMVVGQDSSQLHRDCVASSEICDMVNVPFRPSKALGASTSMVPASLGSLKPEHVLISDDECCRVLFSDSINDGSFPPVDYIKGEETVKFSGCTSFRCQSCNIQISETGGSSTPHLTCPRCSNNYQGTSSSLSNPPVLSARDDREGPTANDNHLYGEDGQQLVSTAPANLTHVNYISSSPCVDGMGTVVMEEPREENTNVHTEKEDSGSLCYEPPRFPSLDIPFFSCDLVQSGSDMQQEFSPLGIRQFMMSSMNCLTPFKLWDSPSHGDSPDALLKSAAKTFTGTPSILKKRHRDLLSPLSDKRVEKKLGTDMTTFTNNICSLDVMFDDNETQETDIPSLQKQNSSACVDDDNKENCGQAYKPTKYGIIDEKNSYKDTVDNSQPNVNQQRLMVDASAAAIEQEPSGVLVEHDVNDLTLSPDQVGLKSNRGLVTSTKTPKSMNRTLEEVPNQNGHLKLSSKNPCSRINSNSPCVRAKEHENLSVAVTRVQAPADNSGEQTRKDGGFETCSIFGGTPFRKGLESPSAWKSPWFFNAFLSSPRLDNELTVEKDASGNDKDNCHGSPNQPGNHSQLASNALIERRTLDFSECGTPSKGDDNKSSAISSKSPSSYLLKGCR 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00326 995 CDD SANT 91 130 IPR001005 -
Vian7g00326 995 PANTHER MYB PROTEIN-RELATED 37 131 - -
Vian7g00326 995 Gene3D - 89 134 - -
Vian7g00326 995 MobiDBLite consensus disorder prediction 1 15 - -
Vian7g00326 995 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 177 231 IPR017930 -
Vian7g00326 995 SUPERFAMILY Homeodomain-like 170 232 IPR009057 -
Vian7g00326 995 ProSiteProfiles Myb-like domain profile. 177 227 IPR001005 -
Vian7g00326 995 Pfam Myb-like DNA-binding domain 40 97 - -
Vian7g00326 995 MobiDBLite consensus disorder prediction 1 38 - -
Vian7g00326 995 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Vian7g00326 995 SMART sant 36 85 IPR001005 -
Vian7g00326 995 SMART sant 88 137 IPR001005 -
Vian7g00326 995 SMART sant 181 229 IPR001005 -
Vian7g00326 995 CDD SANT 184 224 IPR001005 -
Vian7g00326 995 Gene3D - 36 88 - -
Vian7g00326 995 MobiDBLite consensus disorder prediction 929 949 - -
Vian7g00326 995 Gene3D - 183 244 - -
Vian7g00326 995 Pfam Myb-like DNA-binding domain 182 224 IPR001005 -
Vian7g00326 995 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 87 IPR017930 -
Vian7g00326 995 CDD SANT 40 83 IPR001005 -
Vian7g00326 995 FunFam Transcriptional activator Myb isoform A 36 88 - -
Vian7g00326 995 MobiDBLite consensus disorder prediction 971 989 - -
Vian7g00326 995 FunFam Transcription factor MYB3R-2 183 245 - -
Vian7g00326 995 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 131 IPR017930 -
Vian7g00326 995 ProSiteProfiles Myb-like domain profile. 84 130 IPR001005 -
Vian7g00326 995 SUPERFAMILY Homeodomain-like 67 131 IPR009057 -
Vian7g00326 995 MobiDBLite consensus disorder prediction 965 995 - -
Vian7g00326 995 FunFam Transcriptional activator Myb isoform A 89 132 - -
Vian7g00326 995 MobiDBLite consensus disorder prediction 505 536 - -
Vian7g00326 995 SUPERFAMILY Homeodomain-like 35 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00326 Vian-Chr7 9250000 9257041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00326 5 995 MYB Transcription Factor Family AT4G32730 37.894 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vian7g00326 Myb_DNA-bind_6 1.1e-15 CL0123