Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00320 ATGATGAAGAAGAAGAAGAAATCAGATACAGAAAGGCAGCATGACGACTACAATGAATTTAAGAGCAATGAAGATAAAGATGATAGTCAATACAAAATGAAGGAGTGGAAGAAGAAAACACTGATGGAAGTAGGAAAAAGTAAGGAGTATAATGAATTTGAAAGAAATGAAGGTGAAGGTGAAGATGATGCCCATAGTAAGAAGAGGAAGAAGAAAAAATGGAGTAGAGAAAGCAAAAGTAAGGAGTATGAAGTCTTTGAAAAGAATGAAGGTGAAGGTGAAGCTGATGCCAAAGGTAAGGAGAGGAAGAAGAAAAAACTGAGGGAAGATGACAAATGTAAGGAGTATGATGAGTTTGAAAACAATGAACGTGAAGATGATGCCCAAGGTAGGAAGAGAAAGAAGAAAAAATGGAGTAAAGAAAGCAAAAGTAAGGAGTGTAATGTCTTTGAAAGGAATGAAGGTGAAGATGATGTGAAAGATAAGAAGAACAACAAACTGAGTGAAGAAGCAAAAAGTAAGGAGTATAATGAATTTGACAGCAATGAAGTTGAACACAATGCCCAAGGTAAGAAGAAAAAAATGAGTAAAGAAAGCAAAAGTGAAGAGTATAAGGTCTTTGAAAGGAATGGAGGTGAAAGCTATTCCGAAGGTAAGAAGAGGAAGAAGAAAAAATTGAGTACAGAAAGCAAAAGTAAGGAGTATGAAGTCTTTGAAAAGAATGAAGGTGAGGGTGAAGGTGATGTAAAAGGTAAGGAGAGGAAGAAGAAACAACTGAGGGAGGAAGGCAAAAGTAAGGAATTTGAAAACAATAATGGTGAAGATGATGCCCAAGGTAGGAAGGGGGAGAAGAAAAAGTTGAGTAAAGAAAGCAAAAGTGAGGAGTATAATGTCTTTGAAACGAATGAAGGTGAAGATGATGCCAAAGGTAAGAAGAAGAGAAAAAAACATGGTGAAGAAAGCAAAAGCAAGGAGTATAATGAGTTTGAAAATAACGAAGGTGAAGGTGATGCCCAAGGTAAGAAGAGGAAGAAGAAAAAATTGAGTAAAGAAAACAAAAGTAAGGAGTATAATATATTTCAAAGGAATGAAGGTGAAGACAATGTTGAAGGTAGGAAGAGTAAGAAGGAAAAAATGATTGAAGACAGCAAAAGCAAGGACAAAAATATAATGACAAAGAAGAAAGCCAAGGAAGATAATGGTGACTCTTCTAATCCTGAACACACTGTATTATCCAAACCCAAACGGGTAACTTTTTCTGATCAAGTGGATGTTTGTTGTGATGGCTTAGTCCGTGGGAAACGGTTCACACCAGAAGAAGATGAGCAGGTTAAATCGGCTGTTTATAATTTTATAGAGTCTCGTGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCCAGGCTCATCGGGAAATTAGACATTGTTGGAAGGAAATTGCAGCAGCCTTACCCCACAGGCCAGTGTATAGTGTGTATACTCGTGCCCATATTTTGTTTGAAAGGGGTGAGAAGCGAAGGTGGACACCTGAAGAGTATGAATTTTTACGGAAGGTCAAGGAACAACATGGATCTAATTGGAGACAAGTAGCTGACGCATTGGGCAAAAATCGAATTCATGTAAAGGATGCATGGCGTAGAGTGAAATTAAGAAATACAAATAAAGGACGATGGACCCAAGAGGAGTATCAAAAGTTATTTGATTTAGTGAACCTGGACCTACGTGTGAGCGCTTCACAGGGTTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGAAAAGTTGGCCACTAGAAACTCCGTGAGCTGCTGCCACAAGTGGTATGATAAATTAAGATCACCCATGGTTGCTACTGGTGCCTGGAGTGATACTGATGACTATCGCCTGGTCGATGCTTTATATAATTTGGATGCGTGCTGCATGGAGGAGGTGGATTGGGACAATCTGCTTGAGCATAGGACTGGTGAGGCATGTAGAAAACGGTGGAACCAAATTGTCCGATATATTGGGGAGCATGGGGGGAAGCCATTTGCTGAGCAGGTTGAAATTCTTGCAAAAAGATATTGCCCCAACTTATTGCAAGAAAGAGAGGCCTTTGATGCAAAACCTTTGGTTTGTTGA 2148 0.3897 MMKKKKKSDTERQHDDYNEFKSNEDKDDSQYKMKEWKKKTLMEVGKSKEYNEFERNEGEGEDDAHSKKRKKKKWSRESKSKEYEVFEKNEGEGEADAKGKERKKKKLREDDKCKEYDEFENNEREDDAQGRKRKKKKWSKESKSKECNVFERNEGEDDVKDKKNNKLSEEAKSKEYNEFDSNEVEHNAQGKKKKMSKESKSEEYKVFERNGGESYSEGKKRKKKKLSTESKSKEYEVFEKNEGEGEGDVKGKERKKKQLREEGKSKEFENNNGEDDAQGRKGEKKKLSKESKSEEYNVFETNEGEDDAKGKKKRKKHGEESKSKEYNEFENNEGEGDAQGKKRKKKKLSKENKSKEYNIFQRNEGEDNVEGRKSKKEKMIEDSKSKDKNIMTKKKAKEDNGDSSNPEHTVLSKPKRVTFSDQVDVCCDGLVRGKRFTPEEDEQVKSAVYNFIESRGLGDEGLDMVLHCQAHREIRHCWKEIAAALPHRPVYSVYTRAHILFERGEKRRWTPEEYEFLRKVKEQHGSNWRQVADALGKNRIHVKDAWRRVKLRNTNKGRWTQEEYQKLFDLVNLDLRVSASQGYRKSKHGMLRDNIGWEAIGEKLATRNSVSCCHKWYDKLRSPMVATGAWSDTDDYRLVDALYNLDACCMEEVDWDNLLEHRTGEACRKRWNQIVRYIGEHGGKPFAEQVEILAKRYCPNLLQEREAFDAKPLVC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00320 715 CDD SANT 558 617 IPR001005 -
Vian7g00320 715 MobiDBLite consensus disorder prediction 47 414 - -
Vian7g00320 715 MobiDBLite consensus disorder prediction 351 404 - -
Vian7g00320 715 ProSiteProfiles Myb-like domain profile. 622 675 IPR001005 -
Vian7g00320 715 MobiDBLite consensus disorder prediction 1 32 - -
Vian7g00320 715 SUPERFAMILY Homeodomain-like 506 567 IPR009057 -
Vian7g00320 715 ProSiteProfiles Myb-like domain profile. 501 550 IPR001005 -
Vian7g00320 715 MobiDBLite consensus disorder prediction 77 132 - -
Vian7g00320 715 Gene3D - 549 625 - -
Vian7g00320 715 MobiDBLite consensus disorder prediction 141 342 - -
Vian7g00320 715 Pfam Myb-like DNA-binding domain 509 567 - -
Vian7g00320 715 SUPERFAMILY Homeodomain-like 600 678 IPR009057 -
Vian7g00320 715 ProSiteProfiles Myb-like domain profile. 551 620 IPR001005 -
Vian7g00320 715 PANTHER GB|AAC33480.1 153 714 - -
Vian7g00320 715 MobiDBLite consensus disorder prediction 47 68 - -
Vian7g00320 715 SMART sant 555 622 IPR001005 -
Vian7g00320 715 SMART sant 505 552 IPR001005 -
Vian7g00320 715 SMART sant 432 503 IPR001005 -
Vian7g00320 715 SMART sant 626 677 IPR001005 -
Vian7g00320 715 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 506 554 IPR017930 -
Vian7g00320 715 Gene3D - 510 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00320 Vian-Chr7 9070623 9085448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00320 504 693 MYB Transcription Factor Family AT5G02320 25.616 2.62e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian7g00320 Myb_DNA-bind_6 4.6e-12 CL0123