Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00319 ATGGTTGGTAGCATTCTAGGTGTTGGTGGCCTTGTAGAATGTTTAGACCGTGGTTGTCAAGATGAAGACCAACAAATTTCCTACACAAGTGCCACCGTCAGCCACCCTGCCGCCTTGCTACAACCTCGCCATCACCCAACACCAGCGTTGTCGCTGCAAGACCACCTTGAGCCGCCGTCGCGCAATCAATTTACAGCATTCCATCAACCATCTTCATCTTCTCTAGCAGAACCCTCGAACGCGAATCGCAACGCCATCCCGAGTTCGATTTCTCCGCCAGTTCGCGAACATCTTCATCAACCTCCCTCACCGTCATTCAAACACCACCCAACACTACAAGCCGTTGCGACTGCTGCCACCCAGAGCTTCCTTGCGCCGCAACAGCGCCGTTTAAACCACCACCGCAAGGGCAGGACGTCAACCTTGGAAGCATCTTCATTCTCGCGTTCATCATCAAACCCAGAGAGACAGAAATCGCAAAGATGTAGAAACTTCTCCAATGCAGAAGCATCGAATCGTGAATCACATCAACCACAATTCTCCTTCCTCCTGCATGAGCCATTACTGTCTTCCTCAACCTGCAAAGGAAAACCCAATCACAGAAAAACCCTAATGAAGATTGGGCGAAATCGGACTAGCAGCCACAATCATCTTCATCGCACTGCGCCTCATAACCATCAAGCAAAAATCCAAATCAAGCTTCGCATTCCTCAATCCACTGTCATCTTTTACGTTCTTCTCTCTCCTCTAGGTTTTCCGATTCGCGTGCTGATGCTTCCTTCGGCGTCTCACGCTACGCACTCCAATGCCGCTGCTGTGTACACTGTAACTGCTCTCAGTTCATATCAAATCACTTTGGAATTCATGGAAAGGATTTTAAATGGAAACGAAAGTCTTTTGCCTACTAGGCAGAGGTGGCTACTTGAGAAGGAGTTGAACTCAGTTTCTATGAATGTCCCATTTGCTTCATCTGAACGAGCTAAGACATTGTTACTTAAACCTTCTAGGCAATCTCTGTCTCAAGGTCCTATTGTGACTCCAAGACCAAAACTTCCTCATTATGACCATCATCACCACAGTGGTAAATCTTATCCTGTGGTTCCGTCCCCTTATAAAGACCCAGCTTGTAGCCAAATCTGTACTGATCCATTCACTGCAACTCCTTTTGGTTCACCTTGTGGCTGTATATTTCCCATGAAAGTCAGACTAGTACTGGGTGTAGCTCCTCTGGTTGTTTTTCCAGTCATTACTGAGTTAGAGATTGAAATTGCATCTGGAACATATTTGAAGCAGAGCCAAGTGAGGATAATAGGTGTCAGTGCTGACAATCAAAATCAGTGGAGAACCATTGTCGATATTGACTTGGTTCCACTTGGGGAAAAATTTGACAATACCACTGCACTTATGTTATATGAGAGGTTTTGGAACAAAAAAGTTCATCTAAATAGGAGCCTTTTTGGTGATTATTCCACATTGTACGTTGCTTATCCAGGTATTCCATCATCACTGCCACCTGGATATCAAATTGGGAGTAGTCCCCTGCCCAGCAATCCTTTGGTGGGCCTCTGCTTGTCCCTCAAGGATTCTAGGCCTGTCATTGGCTTGGAATCTATGTTGTCAGGCAGAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCGCTATTGCTGCTTCTATTCTCTCCGTTAAAACATTTTCCTTTTCCGAGCTTGAGAAAGCAACAGATAAATTCAATTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATTCTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACAAGGAATGGTCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCTTCGGTATATGCATAGAAGGGAGAAGGCGTTGCTTGGTTTATGAGCTGGTTTACAATGGCAGTGTTGAGTCTCATTTGCATGTTCCACTTCGCGGCTTGGGTTTGAACCTAACTGCCATAGCATGTGGCGGTGGTTCTGTGTGTATGTACGCGGATGCTGTATGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTATAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAAGGAGAGGAGAATCTTGTAACGTGGGCTCGACCTCTGTTGAGATACAGGGAAGGTTTAGAAAAGGTGGTGGATCCATTTTTGGCTGGAAAGTATGACTTCGATGAGATGGCAAAGATGGCGGCTATTGCTTCCTTGTGCGTCCACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCTTTGTGCCATGAATCGGATTTTGGAGGTGACCTTGTCTTTTCTGATAGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGACATTAACTTATGGACCTGAATCTTCCCTCATCACTATGGATTACAGTTCTGGTCTACTAGAAATGGAAAAGGGAACATCAAGCTTGAATGCAGATGAGACATCTTTGCCAATCAGGCACGGGAATAGATCAGGCCCCTTGAGAACAGCCCGGGGTAAGCCATCCTTTACTAAGCTTACTCGAAGTCGCAGCGATCATGTCGTATCCTTCCAAGCTTGTTTGTAA 2733 0.4552 MVGSILGVGGLVECLDRGCQDEDQQISYTSATVSHPAALLQPRHHPTPALSLQDHLEPPSRNQFTAFHQPSSSSLAEPSNANRNAIPSSISPPVREHLHQPPSPSFKHHPTLQAVATAATQSFLAPQQRRLNHHRKGRTSTLEASSFSRSSSNPERQKSQRCRNFSNAEASNRESHQPQFSFLLHEPLLSSSTCKGKPNHRKTLMKIGRNRTSSHNHLHRTAPHNHQAKIQIKLRIPQSTVIFYVLLSPLGFPIRVLMLPSASHATHSNAAAVYTVTALSSYQITLEFMERILNGNESLLPTRQRWLLEKELNSVSMNVPFASSERAKTLLLKPSRQSLSQGPIVTPRPKLPHYDHHHHSGKSYPVVPSPYKDPACSQICTDPFTATPFGSPCGCIFPMKVRLVLGVAPLVVFPVITELEIEIASGTYLKQSQVRIIGVSADNQNQWRTIVDIDLVPLGEKFDNTTALMLYERFWNKKVHLNRSLFGDYSTLYVAYPGIPSSLPPGYQIGSSPLPSNPLVGLCLSLKDSRPVIGLESMLSGRIMSSRSMSLVSAIAASILSVKTFSFSELEKATDKFNSQRVLGEGGFGRVYSGTLDDGNEVAVKLLTRNGQNRDREFIAEVEMLSRLHHRNLVKLFGICIEGRRRCLVYELVYNGSVESHLHVPLRGLGLNLTAIACGGGSVCMYADAVWYVAPEYAMTGHLLVKSDVYSYGVVLLELITGRKPVDMSQPQGEENLVTWARPLLRYREGLEKVVDPFLAGKYDFDEMAKMAAIASLCVHPEVTQRPFMGEVVQALKLIYNDTNESEKESLCHESDFGGDLVFSDSSWLDGEGVTPTLTYGPESSLITMDYSSGLLEMEKGTSSLNADETSLPIRHGNRSGPLRTARGKPSFTKLTRSRSDHVVSFQACL 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00319 910 PANTHER OS01G0750732 PROTEIN 375 662 - -
Vian7g00319 910 MobiDBLite consensus disorder prediction 41 109 - -
Vian7g00319 910 MobiDBLite consensus disorder prediction 141 177 - -
Vian7g00319 910 MobiDBLite consensus disorder prediction 127 177 - -
Vian7g00319 910 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524
Vian7g00319 910 MobiDBLite consensus disorder prediction 339 363 - -
Vian7g00319 910 MobiDBLite consensus disorder prediction 867 888 - -
Vian7g00319 910 Gene3D Phosphorylase Kinase; domain 1 550 652 - -
Vian7g00319 910 FunFam receptor-like serine/threonine-protein kinase ALE2 550 652 - -
Vian7g00319 910 MobiDBLite consensus disorder prediction 56 89 - -
Vian7g00319 910 Gene3D Transferase(Phosphotransferase) domain 1 677 818 - -
Vian7g00319 910 SUPERFAMILY Protein kinase-like (PK-like) 561 799 IPR011009 -
Vian7g00319 910 ProSiteProfiles Protein kinase domain profile. 577 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00319 910 Pfam Protein tyrosine and serine/threonine kinase 690 795 IPR001245 GO:0004672|GO:0006468
Vian7g00319 910 Pfam Protein tyrosine and serine/threonine kinase 579 664 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00319 Vian-Chr7 9048306 9064693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00319 539 897 Receptor kinase-like Gene Family AT5G56890 42.686 8.13e-77 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vian7g00319 PK_Tyr_Ser-Thr 8.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00319 - - gmx:100790546 745.732