Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00301 ATGTCATTGGTTATATCTACAGAGTTGGCTGATGCATCATATAGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCGGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAATTATGAAAAGTACTTCCGTGATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAACTCAGTTCACCCTGACTCTTCTTACCTTCTCCGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCGTTCGACAGTCGTATCTTGTCTACAAGGCATCACAATGCCTATCAGTCCAGTTTTGAATCAGATTTTCTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAATTACAAGAATTGGAGAAGGCTTTGTTTTCGGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGCCCAAATCATGGACATTGATCCTGACATGGCTGAGTGGGCCAATCCACTTCAAGGTATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCTGATTCTTCCAATATTAGCAGCATAAGTAGCACCACCAAAGAAACTTCACAGAACTCACCCCAGACCCCCAAACAATTACTTTATGAATGTGCTAGAGCGCTTTCAGAAGGAAATGAAGAGCAAGCCAAATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGCGTTGCTTCATCCGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCAGATCGTCTTGCAGCTATGCAGATCCTATTTGAGGTCTGCCCGTGTTTTAAATTCGGATTCATCGCTGCAAATGGTGCTATAGTTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACACAGTACATAACTCTAATACAAGCACTTGCTTCAATGCCAGGTAGGCGACCTCATGTGAGATTAACTGGGGTGGATGATCCTGAGACTGTGCAGCGCTCTGTTGGTGGCATGAACATCATAGGAAAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGTCATTTGAGTTTCGAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCGGGAGAAGCACTTGTAGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTTAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACTCTTGATGCAACTCTGCCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGTGAGGGCGAGGATCGAATAGAACGGTACGAAGTTGCCGGAAAATGGAGGGCAAGATTGACCATGGCTGGCTTCACTCCATGTCCAATGAGCACAAATGTTAGAGAAGCAATTAGGAAACTCATAATTACACAGTACTGTGACAGGTTCAAGATAAAGGAGGAAAAGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTACTTCAGCATGGAAGTGA 1770 0.4356 MSLVISTELADASYRNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSENYEKYFRDSPSEELIEPSSSSISGNSVHPDSSYLLRASSGASVIVNNPFDSRILSTRHHNAYQSSFESDFLENRSPDGLDFDGEMRLKLQELEKALFSDEEEEEEDIFETAQIMDIDPDMAEWANPLQGMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLYECARALSEGNEEQAKSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIVEAVRDEKKVHIIDFDISQGTQYITLIQALASMPGRRPHVRLTGVDDPETVQRSVGGMNIIGKRLEKLAEELGLSFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPCPMSTNVREAIRKLIITQYCDRFKIKEEKGALHFGWEDKNLIVTSAWK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00301 589 ProSiteProfiles GRAS family profile. 209 589 IPR005202 -
Vian7g00301 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 199 584 IPR005202 -
Vian7g00301 589 MobiDBLite consensus disorder prediction 184 218 - -
Vian7g00301 589 Pfam GRAS domain family 219 589 IPR005202 -
Vian7g00301 589 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00301 Vian-Chr7 8679787 8681556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00301 1 589 GRAS Transcription Factor Family AT1G21450 60.434 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian7g00301 GRAS 6.5e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00301 - - gmx:100807048 971.459