Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00278 ATGGATCAACACCACTTCCTCCACCACCACTACCACCACCCTCAGGACCACCGCACCACCCGCTACGCTTCCCTCAACCCTCAATCGCATCACAACCACCACCACCATAACAACCTCCCACCGCCGCCGCCCGCGCCGCCACCGCCTCTCTCCTACCACCGCAGCCTCCACCCGGCTCCCCTGCCGCAACCCTACACCCCTTCCACTCCCCAACCCCAACAACAGCAGCAGCAGCAGCAATTCTCTTTCAATCACCACTCATCTCTCCCACACCGCACCCTCGAAGACGATTCACGTTCTCTCCCCTACGACCTCCTCCCTCGCCGGACCACCGCCATCCCCTGGAACCCTAACCCTAGAACTGACGATTTCGATCGCGAATTCCACCACCACCACCACCGCCCTCCCCCGCCGCCGCCTCCCCCGATCGAAACCCTCCGCTACGACCCCGGGCGTCGTGACCGCCTCGTGGTGGATGCCTACGAGCAAAACCCCAGGGAGGCACTCTCTTGGGGCGGCGGTGACTACCACGCGCCTAGCCAGGGCGACGTAGAGCCCCCGCCCTACGTGCGCGTGTACAGCGTGGAATGTGACGCTGACGTGGCCGGTAGAGGGTCCCGGGTGGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTAGTTAGCAAGGTTAGTAACACTGACAAATATTATCATGGTTCTGATAATGTGGGTAGGTATAGTAGAGGGAATAGTAGAGAGCGTAGTCATGAATTCGCACGTACTCCTCCTAAGAAACAGATGCAGAAGAAAAGCGCGCTTCTTAGGATTCAGACTGCTAAACCTAATCATAGGAACCGTGAGGTTGAGCAGTTACGGTACCCCAGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGTAAGGAACAATATTTGGCTCATGGGGTGAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCTTTTGAGTCCAATTCTCTGGTAGCCAAGGCTATTGTTGCGCCGCCTTCGTGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTATGGATTCGGATTTGGGTTCTGGAGAGAAGAATAAAAGGGTTTCGGGCTCTGATGGCTATTATTCTGGTTTGCATCAGCCGTATAGAGTGTCTTCCGTTGTGGTTGTGGATTTAAATAGGTCGCCTTGCAAACGGAATGATAGGTCTGGTTTGGGGAAGGAGGTGAATGTGCGGAAGAGTGTTCAGGATAGTTCTTCTCGGTCTCGTACCAGGGAGGCTGATGATTCTCGTGGGCAAAATGCGGTGCCAAATTCAGTTAAAGCTGGCAATGTCTGTTCTGGTAAATCGACCATAACGGTTGTCAAGAAGAAGAAAATTGTTAAGAGATTGGTGAAGAAAGCTAGTGCAAATTCTAAGACATCTGTGCCAAATTCACTGCAAAAAAGGCTTCCTGGAACTGTGAAAGTTGAGAGTGCTGCACTGATTTCGTCAACGGCCTCTATTCCTGAGAAAATTCAAGCTAATTCAGATGACAAAAGCAACATATATGATGAAGGGCCAGACTGTTTACATTCTTTGCCAAAGGAAGGTAATGTGTTGAAAGAAGATAAAGAGGGAGGTTTACTTCAGCTGAGTTTGGGGCCAGATTACACATCGCAAGAGTGTGACAAAGATTCTGATAATAGGGAACTGTCCAGGTTTGAAATTGAAAGAGATGAAAACATTCCAAAATTTTCTTCTCGTGCTTCTAGTAGTGAAGATAAGAAGAGTGATTCAGATTGTTTAGATGTTAATAATGATGTCCTTGATAATGGAAATATTATTTTTATGCATGATAATGCAAATACTTCCGATTGTTTAGCTGCAAATAATTCTGTTCCAGGTACTATTGCTGAAGTCAATCACATGGATTATGATAATAAGCAATTATGTCAGAATGAAGGATCTCTATCGGTTGGGAATTATTCAAATGTACAATCCCCACTGAATAACAATCTTGTAGATGCAGGGGATGAGATATTAAAAACCAGCGATACTTTTTCAAGTTCAAGAAAAATTGGGATTCAAGATGGTCTAGATTGCCTACAACATGCCAGTGCACTGAAGCAAGGCTCTGATAATGGATCATCTAATTTAGAAGATTGTATTATTGTTCACGGCTCTGGTATCATGAATGATGCTGGAAACCAATTGGCCCATGGTGATGTCACCAGGCACCCTGAGAATTGTGAGACAGAAAAAACATTCCCAAATTCTAATATGTTAGCTGGATCTGGTGAAGGGAACACAAAGAAGATAAAAAAGAGAAAAGCTAGAACACAATTTAATATTTTGAGTTCAGAGATGGAATCCTTATCTCCAGATCATGTAAATCCTGATAACCTTGGAAATAATGTGGACGGAGGTACACTTCTATTGTCGAAAGATCCATCTACTTCTAAAGTTTTAGATCAGTCTGTTCAAAACGATGTTGAGTCAATAACTGGTTTGGATGAGGTTACTGCTTTACACGAGGAAGGGGAGTTTTTAGAGACTCAGTTTTATGCTGCAAATAACAACAATGGTGATGCAAATGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTTACAGCTAACCCAAATTTAACTCAATGTCAATCGCAAATCAGTGCTGTTATTGTGGTTACCACCACATCTGATGTTGAAGCTCCTGTCAATCTCAATGATAACCAAGAACATCAGAAAGAATTTGCGTTGTCAAGCATGGGTATGTGTGTACCGACTTCTGTTCAGTCAATGCTTTCTGTTCAGTCAATGCTTTCTGTTCAGTCATTGCCTTATTCAGAGAGTATTACTAAAAGGTCTGACAATATTTTGAGTGGAGGATCTTTTGACTCTACTGATGCAAATAGGGAAACCATGAGTTCCGAGTATTCTGAATTACAACACTCAGATATAGTCTCTTTTTCACCATGTGAGGACTTAGCATTTCAACACGATCAATTCTCACCATTGGACGGTGAGTGCATAGGAAACATTACTCCAGTTGTGCTTGTGAGTAATACTCAAATTGATGTTTTAGGTGTTGGAAATACAATGGGAGAAAAGACTGATTTACAGGCCGTTAAGGAACATTATCAATATAGAGAATTTGTGCAGAGGTCACCAAGAGCTGACATGGAACCTAATGATCTCAATGTTAAGAATGATTTGCTTGCTCAGCAGAACCTTATGCCCTGTCCAACTAGTGGTGATGAAGTCACTACAAGTAATTCGAATGATGAATTCACTGTGGATGCACCTGGTGCATTATCAGATATATTTTCTCAAGGGATGGCATCTGAAGTACCAGATAAAAGGATTTTAGAATTGACAGCTATCAATGATGAAAATATTTGTGGGGTTGAAGAAAATACTTCGTCAGTACATCAGACGAAACAGAATAGTAGGTCAGATAGTGCATTTGGACACGGTAATATGATAACAAAGAAAACAATTTCAGAACCATCCCAAGTTTCTTCCAAAGTTACAACTCAGGCTTTAAATTCATATCGTTTTGGGTCGAGTGGGACCAAAAATCAGTCAGGTAGTGTCATTCCCAAAACTTTTCCAGGTCATTCTTTTACCTTTTTGAAGTCGGAGACAAAGACATCTGCCTCTTCAACTCATGTGTCAAAACCTCGAACTTGGCATCGGACAGGTAATAATCCCCCTATTTCTTTACCTAGAATCAATTCAGTAAGAGCAGTTCCTCCCAAAAGGCCAATTCTAGAAAGGAAAGGGAACTTTCAAAATACCTCGTATGTTCGTAATGGAAACAGTCTTGTAAGGAAACCTACTCCAGTTCCTGCTTTACCTCAAATCTCCTCTGTAAACAAGTCATCTTCGGGCTTGGGTGAAATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGACGTGACAGATCAACCGATGTACCTGAGAGCAGGAGCAAGATTTTCTCAGCAGAGGCAGAGACAGAGAACACCTCCACTACCAATTGACATCAAATCAGAGGAAAATACATCTTCCTCATTGGTAGAACCTCATTCTGGTGGTTCCTGTGAAAATGTATCTGATCCTAAAACATTTATAGAAATTAATAATAATGCACAGAACTCTTCTGAAGATGCACTGAAGCATTGTGAAATTCCAGAAAACCAACATGTTCCATCCGATAATGGGGAGAGTCAAGTTGAAGCAAACGAAGGCAATCCCCTTTCTCTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACATCAAATTCGCGTGATGTTTCTCTCTCCACTGATGACAACGGCCAAACTGCCTTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAGTTGGTTAGGACTACATTTGAAAGCCATTCCAACCAGACTGCTGCAGTGCCTAATGGCACAGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATACGAGGTTTAGTAAGAAGCGGTTACATAAGGCTGTCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAATTCTTCTGAAAATGACAAGAATTCACGTCATAATCAAAAGGTTTTGCCTCAATTGTTTCGATGGAAAAGAGCAACATTTGCTTCAAGTTTCAATAGTAGTTCCGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACACGGGTTTTCACTTTGGAAATCCAGAGTTTTAGGTGTTGGTGGTTGTAGTTTGAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCTGTTGCTGCTGTAGAGAGGAAGAAGAGAGAGCAGAAAAATGTGGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGAATATTTCGTATTGGTTCAGTTCGATACAGAATGGATCCCACCAGGAGGACACTCCAGAGGATTTCAGTTGATGAATCCCAGTCCTCGGCATCTACCAGTTCAGGTTTGGCCTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAACGATGAGTATGCACATTCTTATTTTTCATCATTGTTGTCTTGTTTAGCAAGCCGTTTAGATGAAACTAGGTTTCCAAGAAGGAAAAGTTTGTATAATTTCAAGTCTATCTGTTTTATTCAAATAACTGCTGTGAGTATTTGCAGATATGTGCGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATCCATGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCGGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGTAATTGTCCATATAGACATGTCAATGTGAACCCCAATGCATCGATTTGTGAAGGATTTCTCAGGGGATATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTACTTTTGAAGCAACAGGAACCTGTACTGAAGGATCCAAATGCAAACTCCATCACCCCAAAAAACAAAGCAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAAACACACCAGAGGACGCTATTTTGGTTTTATTCCTGCTGATGTTTCTGAATCTGGGATGATGGTTGCTCCAAACCGACATAAACAAAGTAGTGAAATTGAAGAGGAACTGTCTGACTACATCAGCCTTGATGTTGTCAGTGAAGAAGTCGCAGACACTGATGATCTATCATTTGATCCAGCAGTGTTCTGTGATAATGATTCCTTGGATGATTTTGATGAACTCATTAAACCAGTTCTTCTACTGAAAACAAAGTTCACATCACAATCACCTAACTCACATATCCTCCACGCAACTGGCGGAGACTTCGGTCGTTTGTTAATGAGGTAA 6135 0.4266 MDQHHFLHHHYHHPQDHRTTRYASLNPQSHHNHHHHNNLPPPPPAPPPPLSYHRSLHPAPLPQPYTPSTPQPQQQQQQQQFSFNHHSSLPHRTLEDDSRSLPYDLLPRRTTAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRDRLVVDAYEQNPREALSWGGGDYHAPSQGDVEPPPYVRVYSVECDADVAGRGSRVESKRWVMSDRERERGRELHESSSNLVSKVSNTDKYYHGSDNVGRYSRGNSRERSHEFARTPPKKQMQKKSALLRIQTAKPNHRNREVEQLRYPSYGPEGSNGFFRGKEQYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSCSVSVPDLNVTPVMDSDLGSGEKNKRVSGSDGYYSGLHQPYRVSSVVVVDLNRSPCKRNDRSGLGKEVNVRKSVQDSSSRSRTREADDSRGQNAVPNSVKAGNVCSGKSTITVVKKKKIVKRLVKKASANSKTSVPNSLQKRLPGTVKVESAALISSTASIPEKIQANSDDKSNIYDEGPDCLHSLPKEGNVLKEDKEGGLLQLSLGPDYTSQECDKDSDNRELSRFEIERDENIPKFSSRASSSEDKKSDSDCLDVNNDVLDNGNIIFMHDNANTSDCLAANNSVPGTIAEVNHMDYDNKQLCQNEGSLSVGNYSNVQSPLNNNLVDAGDEILKTSDTFSSSRKIGIQDGLDCLQHASALKQGSDNGSSNLEDCIIVHGSGIMNDAGNQLAHGDVTRHPENCETEKTFPNSNMLAGSGEGNTKKIKKRKARTQFNILSSEMESLSPDHVNPDNLGNNVDGGTLLLSKDPSTSKVLDQSVQNDVESITGLDEVTALHEEGEFLETQFYAANNNNGDANEVSPSSKRKKVTANPNLTQCQSQISAVIVVTTTSDVEAPVNLNDNQEHQKEFALSSMGMCVPTSVQSMLSVQSMLSVQSLPYSESITKRSDNILSGGSFDSTDANRETMSSEYSELQHSDIVSFSPCEDLAFQHDQFSPLDGECIGNITPVVLVSNTQIDVLGVGNTMGEKTDLQAVKEHYQYREFVQRSPRADMEPNDLNVKNDLLAQQNLMPCPTSGDEVTTSNSNDEFTVDAPGALSDIFSQGMASEVPDKRILELTAINDENICGVEENTSSVHQTKQNSRSDSAFGHGNMITKKTISEPSQVSSKVTTQALNSYRFGSSGTKNQSGSVIPKTFPGHSFTFLKSETKTSASSTHVSKPRTWHRTGNNPPISLPRINSVRAVPPKRPILERKGNFQNTSYVRNGNSLVRKPTPVPALPQISSVNKSSSGLGEISKSTKSESRADVTDQPMYLRAGARFSQQRQRQRTPPLPIDIKSEENTSSSLVEPHSGGSCENVSDPKTFIEINNNAQNSSEDALKHCEIPENQHVPSDNGESQVEANEGNPLSLNTKRIVYIKPKTNQLVATSNSRDVSLSTDDNGQTAFSDGYYKRRKNQLVRTTFESHSNQTAAVPNGTANSDGQGTSNALCNTRFSKKRLHKAVRSSCKRSRASLVWTLCSKNSSENDKNSRHNQKVLPQLFRWKRATFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKNVVCISSQSKRERIFRIGSVRYRMDPTRRTLQRISVDESQSSASTSSGLASKSAYIPRRLVIGNDEYAHSYFSSLLSCLASRLDETRFPRRKSLYNFKSICFIQITAVSICRYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGTCTEGSKCKLHHPKKQSKGKKRKRSGDQKHTRGRYFGFIPADVSESGMMVAPNRHKQSSEIEEELSDYISLDVVSEEVADTDDLSFDPAVFCDNDSLDDFDELIKPVLLLKTKFTSQSPNSHILHATGGDFGRLLMR 2044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1918 1936 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1292 1311 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 585 607 - -
Vian7g00278 2044 ProSiteProfiles Zinc finger C3H1-type profile. 1790 1819 IPR000571 GO:0046872
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1910 1939 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 120 134 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 25 82 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 109 148 - -
Vian7g00278 2044 FunFam zinc finger CCCH domain-containing protein 3 1820 1871 - -
Vian7g00278 2044 FunFam Zinc finger CCCH domain-containing protein 7 1873 1934 - -
Vian7g00278 2044 PANTHER CCCH ZINGC FINGER 261 1708 - -
Vian7g00278 2044 ProSiteProfiles Zinc finger C3H1-type profile. 1872 1899 IPR000571 GO:0046872
Vian7g00278 2044 SMART c3hfinal6 1819 1843 IPR000571 GO:0046872
Vian7g00278 2044 SMART c3hfinal6 1845 1870 IPR000571 GO:0046872
Vian7g00278 2044 SMART c3hfinal6 1899 1921 IPR000571 GO:0046872
Vian7g00278 2044 SMART c3hfinal6 1872 1898 IPR000571 GO:0046872
Vian7g00278 2044 SMART c3hfinal6 1790 1818 IPR000571 GO:0046872
Vian7g00278 2044 MobiDBLite consensus disorder prediction 240 277 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1477 1496 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 38 69 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1278 1370 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 254 271 - -
Vian7g00278 2044 ProSiteProfiles Zinc finger C3H1-type profile. 1845 1871 IPR000571 GO:0046872
Vian7g00278 2044 Gene3D - 1873 1935 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1224 1249 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 366 388 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 409 455 - -
Vian7g00278 2044 Coils Coil 1622 1642 - -
Vian7g00278 2044 MobiDBLite consensus disorder prediction 1349 1370 - -
Vian7g00278 2044 Gene3D - 1817 1872 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vian7g00278 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00278 - - vun:114193719 3362.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00278 7 8198710 8207942 Vian7g00278 7 8198710 8207942 ECH