Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00274 ATGCCTATTCGATACTCATACAAGGAGATTAAAAAGATGACCAGAGGTTTCAATGAAAAATTGGGTGAAGGAGGTTATGGTTTTGTATTCAAGGGGAAGTTGCGTAGTGGACCATGTGTTGCTATAAAAGTGTTACGAAAATCAAAAGGTAAAGGAGAAGATTTTATCAACGAAGTTGCAACAATTGGAAGAATACATCACCAAAATGTAGTGCATTTAATTGGATATTGTGCTGAGGGCTCAAAACGTGCCCTTGTTTATGAGTTCATGTCTAATGGATCTCTTGACAAGTTTATATTTTCTAAAGAAGGAAATCTACATTTAACCTATGACACAATACATGATATAGCAATTGGAGTAGCACGTGGAATTTCATATCTACATCATGGATGTGAGATGCAAATTTTGCATTTTGACATTAAACCCCACAACATCCTCCTTGATGAAAAATTCACCCCAAAGATATCTGATTTTGGATTGGCAAAACTATATTCAACAGATAAAAGTGTTGTGACTATGACAGCAACAAGAGGAACAATTGGGTACATGGCTCCAGAGTTGTTTTATAAAAATGTTGGAAGAATATCACATAAGTCTGATGTTTATAGTTTTGGAATGTTTTTGATGGAAATAGCAAACAAGAGGAAAAACCTAAACCTCCATGCAGAGCATTCAAGCCAACTTTACTTTCCCTTGTGGATTTATGATCAACTTGGCAAAGGAAAAAATATAGAAATGGAAGATGTCACCGAGAATGAGAACAAAATTGTAAAAAAGATGATCATAGTTTCACTTTGGTGTATACAATTGAAACCAAATGATCGCCCTTCCATAAATAAAGTAGTGGAAATGCTTGAAGGAGACATTGCAAACCTAAAATTACCTCCAAAGCCTTCTCTGTATCCACATGACACATCGGAAGATGGTGAAAGAATATTCTCTAACCAAACAACATTGTCCCACTTTGTTGGTTCTTCAAGTTTATCCAGTGAAGAAAAGATTGCCTCTAATGTTACCTTAGACGAAAGTATTTGA 1035 0.3527 MPIRYSYKEIKKMTRGFNEKLGEGGYGFVFKGKLRSGPCVAIKVLRKSKGKGEDFINEVATIGRIHHQNVVHLIGYCAEGSKRALVYEFMSNGSLDKFIFSKEGNLHLTYDTIHDIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFTPKISDFGLAKLYSTDKSVVTMTATRGTIGYMAPELFYKNVGRISHKSDVYSFGMFLMEIANKRKNLNLHAEHSSQLYFPLWIYDQLGKGKNIEMEDVTENENKIVKKMIIVSLWCIQLKPNDRPSINKVVEMLEGDIANLKLPPKPSLYPHDTSEDGERIFSNQTTLSHFVGSSSLSSEEKIASNVTLDESI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00274 344 Gene3D Transferase(Phosphotransferase) domain 1 90 293 - -
Vian7g00274 344 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Vian7g00274 344 ProSiteProfiles Protein kinase domain profile. 15 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00274 344 SMART serkin_6 15 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00274 344 FunFam serine/threonine-protein kinase PBS1-like 1 89 - -
Vian7g00274 344 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 305 IPR045874 GO:0004672
Vian7g00274 344 Pfam Protein kinase domain 18 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00274 344 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Vian7g00274 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Vian7g00274 344 SUPERFAMILY Protein kinase-like (PK-like) 4 286 IPR011009 -
Vian7g00274 344 FunFam PR5-like receptor kinase 90 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00274 Vian-Chr7 8057844 8058878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00274 1 300 Receptor kinase-like Gene Family AT1G66910 50.980 5.05e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vian7g00274 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00274 - - gmx:100305367 553.132