Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00266 ATGTGGTTTCTGCAACTGATTATGAAGAGGCACTCGGCTTGGTTTGTTAAAAGTAACAGGGAAGAATTAAACATGATGGCAAGTGTGTTGCTCCTCCAACGTCATTCTGTATTCATGAAGTTATTGCTAATACTTATTCTTATCAGAAGTGGCAGCGCTCATAACGAGTGCGATCGTGAAAAATTGTCTTGTGGGCGGGGCCAACCCCTTATCAGATTTCCCTTCCAACTCGTGAAGGAGTTGGAGGAGCCATGCAGTTATCCCCGTCTTTGTCTTTCTTGTACTGAAAAACATCAGACCATGCTTCTGCTTCCTACGGTCAAACTCCAAGTCAATTACATATTCTATGAATATCAGAAAATTTCCTTAACTGACCCGGAAAACTGCTTTTCCAACAAGTTTATGCAAATCATCAATTTTGTTCAGAGTTACCAATTTGAATCACTATATTATGAACCATACAGTAACTTGAGCTTCTTCAACTGTACTTCAGCTGGGCATCGACAACTCCGCTACCGGGAATCATATTTCCAAGATTTGGTCTCCTGTCCGATTTTCATTTCTGATTCTTTTGAAAGTGTCCTCGAATTAGATCTAACATCCTGTACCAAGATGTTCGACATCCCTTCGCCAATCCCTTCCACCTACAGGTATCCCTTGGATTTGAAATGGTTCAAACCAAATTGTTCCGAGTGCGAAGCTAAAGGCAAGAGATGTAAATGGAAGACCAACAACGACACAGAAGGAGACATCGAATGTTTTGAATGCACACGAAAAAGAATTCACGTTCCTAAATATCTTATTTTTGCTACTACAGGTTCGATCTTTTTGGGGCTGGTGGTCACTGCTGTCTTTAAGAGCATTGTCTATTTTAGGGAAAAACAAGAAGATCAAGCAAGAGTGGACAAGTTTTTAGATGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTTAAGGAAATGTTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGTAAACTTTCCAGTGAGATACCCGTGGCTGTGAAGATCCTCAACAATACAGAGGGAGAAGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGCTTGCTTGGCTTCTGTGCAGAAGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATTTTTCCTCCCGAAGACAAGGACCATTTCCTTGGCTGGGAGAAGCTTCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCATCCCATTATTCACTTTGACATCAATCCTCACAACGTGTTACTTGATGACAACTTCACTCCAAAAATATCTGATTTTGGCTTGGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCTGAAGTCTTCTCTAGAAACTTTGGAAACGTGTCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGGAAGAATGTGGACATGTCTTCTCCAGAAGATTTCCATGTTCTGTACCCTGATTGGATCCATAACCTGGTTGATGGAGATGTGCATATCCATGTTGAGGATGAAGATGATTTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTCAAGAGGAAAACCAGATTGCCATGCCTCCTAATCCATTTCACTCCGCAACTTCCACTACAGGTAAGGGACCCATTTCGACAAGACGACCTTTGCATTTGGAAGTGATTGAAGAATGA 1908 0.4198 MWFLQLIMKRHSAWFVKSNREELNMMASVLLLQRHSVFMKLLLILILIRSGSAHNECDREKLSCGRGQPLIRFPFQLVKELEEPCSYPRLCLSCTEKHQTMLLLPTVKLQVNYIFYEYQKISLTDPENCFSNKFMQIINFVQSYQFESLYYEPYSNLSFFNCTSAGHRQLRYRESYFQDLVSCPIFISDSFESVLELDLTSCTKMFDIPSPIPSTYRYPLDLKWFKPNCSECEAKGKRCKWKTNNDTEGDIECFECTRKRIHVPKYLIFATTGSIFLGLVVTAVFKSIVYFREKQEDQARVDKFLDDYRAEKPARFTYADLKRITNGFKEMLGEGAHGAVFRGKLSSEIPVAVKILNNTEGEGNEFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPEDFHVLYPDWIHNLVDGDVHIHVEDEDDFKIAKKLAIIGLWCIQWQPGNRPSIKSVIHMLETQEENQIAMPPNPFHSATSTTGKGPISTRRPLHLEVIEE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00266 635 PANTHER RUST RESISTANCE KINASE LR10-RELATED 298 613 IPR045874 GO:0004672
Vian7g00266 635 MobiDBLite consensus disorder prediction 604 622 - -
Vian7g00266 635 MobiDBLite consensus disorder prediction 604 627 - -
Vian7g00266 635 Pfam Wall-associated receptor kinase galacturonan-binding 57 125 IPR025287 GO:0030247
Vian7g00266 635 FunFam PR5-like receptor kinase 401 606 - -
Vian7g00266 635 Gene3D Transferase(Phosphotransferase) domain 1 401 608 - -
Vian7g00266 635 ProSiteProfiles Protein kinase domain profile. 326 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00266 635 Gene3D Phosphorylase Kinase; domain 1 299 400 - -
Vian7g00266 635 FunFam S-receptor-like serine/threonine-protein kinase 293 400 - -
Vian7g00266 635 SUPERFAMILY Protein kinase-like (PK-like) 310 598 IPR011009 -
Vian7g00266 635 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Vian7g00266 635 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00266 Vian-Chr7 7877070 7879150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00266 26 609 Receptor kinase-like Gene Family AT5G38260 34.665 7.87e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vian7g00266 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00266 - - gmx:100790964 898.271