Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00261 ATGATGGCAAGTGTGTTACTCCTCCAACGTGATTCTGTATTGATGAAGCTATCGTTAATGCTTATTCTTATCAGAAGTGGCAGCGCTCACAACGAGTGCGATGAGGAAAATTTGTCTTGCGGGCCGAACCAACCCCTTATCAGATTTCCCTTCCAACTCGTAAAGGAGATGAAGGAGCCATGCAGTTATCCCCGTCTTTGTCTTTCTTGTACTGAAAAAAATGAGACCATGCTTATGCTTCCAACGACCAAACTCCAAGTCAAAAACATATACTACGAAGAAAAGGAAATTTCCTTAACTGACCCGGAATACTGCTTTTTCAACAAGTTTACGCAAATAATCAATTTTTTTCAGAGTTACCAATTTGAATCAGTACATCGTCACTTGAGCTTCTTCAATTGTACTTCAGCTGGCCATCGACACCTCCGCTACAGGGATGACTCTGTTGGTATCTCATATTCCCAAGATTTGGTCTCCTGTCCAATTTTCATTTCTGATTCTTTAGACAGTGTCCTCGAATTAGATCTAACATCCTGTACCAAGATGTTCGACATCCTTTCGCCAATCGGTTCCACCTACAGGTCTCCCTTGTATTGGAAATGGTTCAAACCAAATTGTTCCGAGTGCGAAGCTAAAGGCAAGAGATGTAAATGGAAGACCAACAACGACACAGAAGGAGACATCGAATGCTTTGAATGCACACGAAAAAGAATTCACGTTTCTAAATCTCTTATTTTTGCTACTACAGGTTCGATCTTTTTGGGGCTGGTGGTCACTGCTGTCTTTAAGAGCATTGTCTATTTTAGGGAAAAACAAGAAGATCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTTAAAAGAATCACCAATGGCTTTAGGGAAATGTTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCCAGTGAGATACCCGTGGCTGTGAAGATCCTCAACAATACAGAGGGAGAAGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGCTTGCTTGGCTTCTGTGCAGAAGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCTTTACAAAGCTTCATTTTTCCTCCAGAAGACAAGGACCATTTCCTTGGCTGGGAGAAGCTTCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCATCCCATTATTCACTTTGACATCAATCCTCACAACGTGTTACTTGATGACAACTTCACTCCAAAAATATCTGATTTTGGCTTGGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCTGAAGTCTTCTCTAGAAACTTTGGAAACGTATCTTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGTTAGAAATGGTTGGTGGGAGGAAGAATGTGGACATGTCTTCTCCAGAAGATTTCCATGTTCTGTACCCTGATTGGATCCATAACCTGGTTGATGGAGATGTGCATATCCATGTTGAGGATGAAGATGATTTTAAGATTGCAAAGAAACTGGCAATTATTGGGCTTTGGTGCATTCAGTGGCAGCCAGGGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTCAAGAGGAAAACCAGATTGCCGTGCCTCCTAATCCATTTCACTCGGCAACTTCCACTACAGTTAAGGGACCCATTTCGACAAGACGACCTTTGCATTTGGAAGTGATTGAAGAATGA 1839 0.4225 MMASVLLLQRDSVLMKLSLMLILIRSGSAHNECDEENLSCGPNQPLIRFPFQLVKEMKEPCSYPRLCLSCTEKNETMLMLPTTKLQVKNIYYEEKEISLTDPEYCFFNKFTQIINFFQSYQFESVHRHLSFFNCTSAGHRHLRYRDDSVGISYSQDLVSCPIFISDSLDSVLELDLTSCTKMFDILSPIGSTYRSPLYWKWFKPNCSECEAKGKRCKWKTNNDTEGDIECFECTRKRIHVSKSLIFATTGSIFLGLVVTAVFKSIVYFREKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFREMLGEGAHGAVFRGKLSSEIPVAVKILNNTEGEGNEFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPEDFHVLYPDWIHNLVDGDVHIHVEDEDDFKIAKKLAIIGLWCIQWQPGNRPSIKSVIHMLETQEENQIAVPPNPFHSATSTTVKGPISTRRPLHLEVIEE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00261 612 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Vian7g00261 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 275 590 IPR045874 GO:0004672
Vian7g00261 612 Gene3D Phosphorylase Kinase; domain 1 276 377 - -
Vian7g00261 612 SUPERFAMILY Protein kinase-like (PK-like) 287 575 IPR011009 -
Vian7g00261 612 Pfam Protein tyrosine and serine/threonine kinase 306 572 IPR001245 GO:0004672|GO:0006468
Vian7g00261 612 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Vian7g00261 612 FunFam S-receptor-like serine/threonine-protein kinase 270 377 - -
Vian7g00261 612 Pfam Wall-associated receptor kinase galacturonan-binding 33 101 IPR025287 GO:0030247
Vian7g00261 612 ProSiteProfiles Protein kinase domain profile. 303 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00261 612 FunFam PR5-like receptor kinase 378 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00261 Vian-Chr7 7731833 7733849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00261 252 587 Receptor kinase-like Gene Family AT4G18250 42.775 8.70e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vian7g00261 PK_Tyr_Ser-Thr 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00261 - - gmx:102662104 902.894