Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian7g00257 | ATGCTCTCGTTTTCAGTAATAAAGAGTTTTATTCAGTTAACCTTCGTAGAAGTGAGGAATATGCATGTCTTACTAATTTTTGGAACCACCGAAACTTGTCTACATTTTTCATTTAAGCCATTACAGATATGTGCAAGGCACAAAGAAACGAAGAATGATGATGAGTCTTTGAGATCACGTAGGAATGAAGGCTGCAATGAAACTCTAGGGTTGGGGAGCAATGAAGCATCAGCAACTGGTTCAATGATGACCCAATCAGGGTGGGCTTTGAATGAATTGAAGAAACCAATAGTCACGTATGAATGGCTAAAACAATGCTCAGAGGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATTCCTGCAGATGTTCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGTTGTTATCCTCTATGCCGGACTAATTCAGTACATGAGCTCAAGGATATCTTATACTTATTTAAACTTGGTGGATATTTGTGTTCTTGACTGTTCTTACGCTCCACAAGGTGACAAGTATAAGGTAGCAAAACGATGGGGCCACATTCATATTGTGATAAAGAAATGGTTTGATCAATCAATTGCTCGAAGAGCATGTCTGAATGAGGAGTTCTTCCCTGTTCAGCATGGATCTGTATCTTCACATAAAGTAACTAGGGACTTAACAATGCAACATAGCCAAGAAAAGGATATTGGGAAATTGCAATCTGCGGCATCCTCAGGTACTACAGATTCAAATGTGCAAGTTTCTTGTGCTGAGTTCAGGGATAGAGATCATGAAGCTATGCCATCAGAATTTATGTCCTCAGTTTCACAAACCCGTATATTTGCTAAGGAGGCAGATGCTGAACCTCCATTGCAGACCAGTGGTGAATTGAACCTTGACAATATTGTCGCTGATGATTCTGAATCTGATGATAATGACATGTACTTATCAGAGTGCAGAATATTACTAGTTGGTTTTGAAGCTTTAGAAATGCGGAAACTAATTAATATTGTGCGCAAAGGTGGAGGCTCCCGGTATATGTCTTTTAGTGACAAATTGACACACATAATAGTTGGGAATCCTACTGAAATGGAAAAGAAGGATGTAAGGAGTCTCGCTGCTTTAGGTGTAATTTATGTTGTTAAAACCTCATGGCTTGAAGATTGTGACCATAAAAAGAAAGAAGTCCCAGTGCTTAGGAGACACGTTGCGTATGATCTACTTCATCCAAAAGGTCTGCTGGAGAGCACTTTTTACTTGGTAAAAGGAGCTGTAACAGAAAGCACATCTATGGATCACAAATCTTTAGAGAAAAGAAAAGAAGAGATACAAGATATGGATATAAATGGTCACTCATTCCGTAAAGCAAATTGTAGAACAATGTTGCAAAATCAACTTCCTGATAATAAATTGAGCACACAAGGAATGAGCCAGCATGACTTCAGTGTTCAATATGAAAAATCAGCAAATGTTTTCAGAGGAAAACTGTTTTGTTTTTCAAATTTGTTTCCTGAAGAAAAGAGAGGTGAGATTGTTCAATGGATAAGTCAAGGGGGAGGAGAGGTAATAAGTGGGCAAGCAGAACAGATTGTCCACTATACTGTTGAGTGTCATGGTGTAACACCCATGTCGACTGGTGATTCGAAGAGTTGGTCTGTTTCCAGTCACTGGATACGATCTTGTTTGGAGGCTGGATCCTTGCTGGATGTTGATAGTCACATTCTTTATTCTCCACTTCCCTGCCATGTTCCCTTGCCTGGATTTGAAAGATTCAGGTTTTGTGTTTCACAGTATGAGGAGAAAGACAGAAATCTCCTAAGAAACTTGTGTTTTGTACTAGGAGCTAAATTTGGGGAGAAGTTGCATAAGAAGGTTACGCATTTGTTGTGTAAATTCACCAATGGACCCAAGTATGATGGTGCTCGTAAATGGGGGATTCAATCAGTTACATGTGAATGGATATTTGAATGCGTCAAACAGAATGGACTTGTTGCCGTTGATCAATTTTTACCAAAAGAAGTAACTGCTCAAGATCAAGAGGCAGGACTTTGCACCGTAAGTCAGTTTCCTACCCAGGCTGCTCAAATGATAAGTGGCATGCCCTCGCAATTGTCAAGTCAATCACAAATTTTGAGAGGCATCACAGATAAAAATGTGGGTTGTGGAGTTGGTAATCATGAGACCAATTTTAAGAAACCAAGTGTTTATAGCAAAAAGGCAAGACTTGTGGAAGAACCTTGCCTATCCAACAAGATGCCTTCGGCATCAAATTCAGGTATCCATGCCTATGGAAAGAATTTTTCTGAAGACAATATGCTAATAGATGGTGGAGAGGTTTGTCGTACTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACTAGTAAGATTTACCCATCTGATCTTTCAGTCCTTGGTGAAGATAATTCCAATCCCCATACCGTTTTTGGGTTATCTAAACACTGGTTAAACAGAAATGACAGAAAGGAAGATGATGGGGAGGCTTCTCAAGACAGACGAGCAGGAATATACGATGGTTTTAGTGAAACACAGACAGAATCTCAGGTTGTTAGTTATGAAGAAGATTTGTCAGGAAGGCAAAGCCTTATAGATAAATACCGAACTCGAAGTAGCACGCAGTGA | 2682 | 0.3963 | MLSFSVIKSFIQLTFVEVRNMHVLLIFGTTETCLHFSFKPLQICARHKETKNDDESLRSRRNEGCNETLGLGSNEASATGSMMTQSGWALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIPADVRKEMEKLILQNVVILYAGLIQYMSSRISYTYLNLVDICVLDCSYAPQGDKYKVAKRWGHIHIVIKKWFDQSIARRACLNEEFFPVQHGSVSSHKVTRDLTMQHSQEKDIGKLQSAASSGTTDSNVQVSCAEFRDRDHEAMPSEFMSSVSQTRIFAKEADAEPPLQTSGELNLDNIVADDSESDDNDMYLSECRILLVGFEALEMRKLINIVRKGGGSRYMSFSDKLTHIIVGNPTEMEKKDVRSLAALGVIYVVKTSWLEDCDHKKKEVPVLRRHVAYDLLHPKGLLESTFYLVKGAVTESTSMDHKSLEKRKEEIQDMDINGHSFRKANCRTMLQNQLPDNKLSTQGMSQHDFSVQYEKSANVFRGKLFCFSNLFPEEKRGEIVQWISQGGGEVISGQAEQIVHYTVECHGVTPMSTGDSKSWSVSSHWIRSCLEAGSLLDVDSHILYSPLPCHVPLPGFERFRFCVSQYEEKDRNLLRNLCFVLGAKFGEKLHKKVTHLLCKFTNGPKYDGARKWGIQSVTCEWIFECVKQNGLVAVDQFLPKEVTAQDQEAGLCTVSQFPTQAAQMISGMPSQLSSQSQILRGITDKNVGCGVGNHETNFKKPSVYSKKARLVEEPCLSNKMPSASNSGIHAYGKNFSEDNMLIDGGEVCRTVPDVAAAIEDLLEQTSKIYPSDLSVLGEDNSNPHTVFGLSKHWLNRNDRKEDDGEASQDRRAGIYDGFSETQTESQVVSYEEDLSGRQSLIDKYRTRSSTQ | 893 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian7g00257 | 893 | Gene3D | BRCT domain | 592 | 686 | IPR036420 | - | |
| Vian7g00257 | 893 | ProSiteProfiles | BRCT domain profile. | 96 | 120 | IPR001357 | - | |
| Vian7g00257 | 893 | SUPERFAMILY | BRCT domain | 91 | 222 | IPR036420 | - | |
| Vian7g00257 | 893 | PANTHER | DNA REPLICATION REGULATOR DPB11-RELATED | 90 | 892 | - | - | |
| Vian7g00257 | 893 | SMART | BRCT_7 | 323 | 403 | IPR001357 | - | |
| Vian7g00257 | 893 | SMART | BRCT_7 | 499 | 575 | IPR001357 | - | |
| Vian7g00257 | 893 | SMART | BRCT_7 | 595 | 671 | IPR001357 | - | |
| Vian7g00257 | 893 | FunFam | Transcription coactivator | 303 | 413 | - | - | |
| Vian7g00257 | 893 | FunFam | Transcription coactivator | 494 | 591 | - | - | |
| Vian7g00257 | 893 | Gene3D | BRCT domain | 122 | 225 | IPR036420 | - |
Showing 1 to 10 of 26 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian7g00257 | K10728 | - | gmx:100804966 | 1169.84 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vian7g00257 | 7 | 7640548 | 7650849 | Vian7g00257 | 7 | 7640548 | 7650849 | ECH |
Showing 1 to 1 of 1 entries