Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00257 ATGCTCTCGTTTTCAGTAATAAAGAGTTTTATTCAGTTAACCTTCGTAGAAGTGAGGAATATGCATGTCTTACTAATTTTTGGAACCACCGAAACTTGTCTACATTTTTCATTTAAGCCATTACAGATATGTGCAAGGCACAAAGAAACGAAGAATGATGATGAGTCTTTGAGATCACGTAGGAATGAAGGCTGCAATGAAACTCTAGGGTTGGGGAGCAATGAAGCATCAGCAACTGGTTCAATGATGACCCAATCAGGGTGGGCTTTGAATGAATTGAAGAAACCAATAGTCACGTATGAATGGCTAAAACAATGCTCAGAGGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATTCCTGCAGATGTTCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGTTGTTATCCTCTATGCCGGACTAATTCAGTACATGAGCTCAAGGATATCTTATACTTATTTAAACTTGGTGGATATTTGTGTTCTTGACTGTTCTTACGCTCCACAAGGTGACAAGTATAAGGTAGCAAAACGATGGGGCCACATTCATATTGTGATAAAGAAATGGTTTGATCAATCAATTGCTCGAAGAGCATGTCTGAATGAGGAGTTCTTCCCTGTTCAGCATGGATCTGTATCTTCACATAAAGTAACTAGGGACTTAACAATGCAACATAGCCAAGAAAAGGATATTGGGAAATTGCAATCTGCGGCATCCTCAGGTACTACAGATTCAAATGTGCAAGTTTCTTGTGCTGAGTTCAGGGATAGAGATCATGAAGCTATGCCATCAGAATTTATGTCCTCAGTTTCACAAACCCGTATATTTGCTAAGGAGGCAGATGCTGAACCTCCATTGCAGACCAGTGGTGAATTGAACCTTGACAATATTGTCGCTGATGATTCTGAATCTGATGATAATGACATGTACTTATCAGAGTGCAGAATATTACTAGTTGGTTTTGAAGCTTTAGAAATGCGGAAACTAATTAATATTGTGCGCAAAGGTGGAGGCTCCCGGTATATGTCTTTTAGTGACAAATTGACACACATAATAGTTGGGAATCCTACTGAAATGGAAAAGAAGGATGTAAGGAGTCTCGCTGCTTTAGGTGTAATTTATGTTGTTAAAACCTCATGGCTTGAAGATTGTGACCATAAAAAGAAAGAAGTCCCAGTGCTTAGGAGACACGTTGCGTATGATCTACTTCATCCAAAAGGTCTGCTGGAGAGCACTTTTTACTTGGTAAAAGGAGCTGTAACAGAAAGCACATCTATGGATCACAAATCTTTAGAGAAAAGAAAAGAAGAGATACAAGATATGGATATAAATGGTCACTCATTCCGTAAAGCAAATTGTAGAACAATGTTGCAAAATCAACTTCCTGATAATAAATTGAGCACACAAGGAATGAGCCAGCATGACTTCAGTGTTCAATATGAAAAATCAGCAAATGTTTTCAGAGGAAAACTGTTTTGTTTTTCAAATTTGTTTCCTGAAGAAAAGAGAGGTGAGATTGTTCAATGGATAAGTCAAGGGGGAGGAGAGGTAATAAGTGGGCAAGCAGAACAGATTGTCCACTATACTGTTGAGTGTCATGGTGTAACACCCATGTCGACTGGTGATTCGAAGAGTTGGTCTGTTTCCAGTCACTGGATACGATCTTGTTTGGAGGCTGGATCCTTGCTGGATGTTGATAGTCACATTCTTTATTCTCCACTTCCCTGCCATGTTCCCTTGCCTGGATTTGAAAGATTCAGGTTTTGTGTTTCACAGTATGAGGAGAAAGACAGAAATCTCCTAAGAAACTTGTGTTTTGTACTAGGAGCTAAATTTGGGGAGAAGTTGCATAAGAAGGTTACGCATTTGTTGTGTAAATTCACCAATGGACCCAAGTATGATGGTGCTCGTAAATGGGGGATTCAATCAGTTACATGTGAATGGATATTTGAATGCGTCAAACAGAATGGACTTGTTGCCGTTGATCAATTTTTACCAAAAGAAGTAACTGCTCAAGATCAAGAGGCAGGACTTTGCACCGTAAGTCAGTTTCCTACCCAGGCTGCTCAAATGATAAGTGGCATGCCCTCGCAATTGTCAAGTCAATCACAAATTTTGAGAGGCATCACAGATAAAAATGTGGGTTGTGGAGTTGGTAATCATGAGACCAATTTTAAGAAACCAAGTGTTTATAGCAAAAAGGCAAGACTTGTGGAAGAACCTTGCCTATCCAACAAGATGCCTTCGGCATCAAATTCAGGTATCCATGCCTATGGAAAGAATTTTTCTGAAGACAATATGCTAATAGATGGTGGAGAGGTTTGTCGTACTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACTAGTAAGATTTACCCATCTGATCTTTCAGTCCTTGGTGAAGATAATTCCAATCCCCATACCGTTTTTGGGTTATCTAAACACTGGTTAAACAGAAATGACAGAAAGGAAGATGATGGGGAGGCTTCTCAAGACAGACGAGCAGGAATATACGATGGTTTTAGTGAAACACAGACAGAATCTCAGGTTGTTAGTTATGAAGAAGATTTGTCAGGAAGGCAAAGCCTTATAGATAAATACCGAACTCGAAGTAGCACGCAGTGA 2682 0.3963 MLSFSVIKSFIQLTFVEVRNMHVLLIFGTTETCLHFSFKPLQICARHKETKNDDESLRSRRNEGCNETLGLGSNEASATGSMMTQSGWALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIPADVRKEMEKLILQNVVILYAGLIQYMSSRISYTYLNLVDICVLDCSYAPQGDKYKVAKRWGHIHIVIKKWFDQSIARRACLNEEFFPVQHGSVSSHKVTRDLTMQHSQEKDIGKLQSAASSGTTDSNVQVSCAEFRDRDHEAMPSEFMSSVSQTRIFAKEADAEPPLQTSGELNLDNIVADDSESDDNDMYLSECRILLVGFEALEMRKLINIVRKGGGSRYMSFSDKLTHIIVGNPTEMEKKDVRSLAALGVIYVVKTSWLEDCDHKKKEVPVLRRHVAYDLLHPKGLLESTFYLVKGAVTESTSMDHKSLEKRKEEIQDMDINGHSFRKANCRTMLQNQLPDNKLSTQGMSQHDFSVQYEKSANVFRGKLFCFSNLFPEEKRGEIVQWISQGGGEVISGQAEQIVHYTVECHGVTPMSTGDSKSWSVSSHWIRSCLEAGSLLDVDSHILYSPLPCHVPLPGFERFRFCVSQYEEKDRNLLRNLCFVLGAKFGEKLHKKVTHLLCKFTNGPKYDGARKWGIQSVTCEWIFECVKQNGLVAVDQFLPKEVTAQDQEAGLCTVSQFPTQAAQMISGMPSQLSSQSQILRGITDKNVGCGVGNHETNFKKPSVYSKKARLVEEPCLSNKMPSASNSGIHAYGKNFSEDNMLIDGGEVCRTVPDVAAAIEDLLEQTSKIYPSDLSVLGEDNSNPHTVFGLSKHWLNRNDRKEDDGEASQDRRAGIYDGFSETQTESQVVSYEEDLSGRQSLIDKYRTRSSTQ 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00257 893 Gene3D BRCT domain 592 686 IPR036420 -
Vian7g00257 893 ProSiteProfiles BRCT domain profile. 96 120 IPR001357 -
Vian7g00257 893 SUPERFAMILY BRCT domain 91 222 IPR036420 -
Vian7g00257 893 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 90 892 - -
Vian7g00257 893 SMART BRCT_7 323 403 IPR001357 -
Vian7g00257 893 SMART BRCT_7 499 575 IPR001357 -
Vian7g00257 893 SMART BRCT_7 595 671 IPR001357 -
Vian7g00257 893 FunFam Transcription coactivator 303 413 - -
Vian7g00257 893 FunFam Transcription coactivator 494 591 - -
Vian7g00257 893 Gene3D BRCT domain 122 225 IPR036420 -
Vian7g00257 893 ProSiteProfiles BRCT domain profile. 497 585 IPR001357 -
Vian7g00257 893 MobiDBLite consensus disorder prediction 860 874 - -
Vian7g00257 893 MobiDBLite consensus disorder prediction 840 874 - -
Vian7g00257 893 ProSiteProfiles BRCT domain profile. 598 681 IPR001357 -
Vian7g00257 893 Pfam twin BRCT domain 602 663 IPR001357 -
Vian7g00257 893 CDD BRCT_TopBP1_rpt2_like 122 212 - -
Vian7g00257 893 Pfam BRCT domain, a BRCA1 C-terminus domain 499 582 IPR001357 -
Vian7g00257 893 Gene3D BRCT domain 307 410 IPR036420 -
Vian7g00257 893 SUPERFAMILY BRCT domain 319 407 IPR036420 -
Vian7g00257 893 SUPERFAMILY BRCT domain 563 682 IPR036420 -
Vian7g00257 893 Gene3D BRCT domain 494 591 IPR036420 -
Vian7g00257 893 ProSiteProfiles BRCT domain profile. 321 413 IPR001357 -
Vian7g00257 893 SUPERFAMILY BRCT domain 500 587 IPR036420 -
Vian7g00257 893 CDD BRCT_TopBP1_rpt2_like 596 671 - -
Vian7g00257 893 ProSiteProfiles BRCT domain profile. 118 222 IPR001357 -
Vian7g00257 893 Gene3D BRCT domain 75 121 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00257 88 891 Core DNA Replication Machinery Family AT1G77320 42.520 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00257 K10728 - gmx:100804966 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00257 7 7640548 7650849 Vian7g00257 7 7640548 7650849 ECH