Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00254 ATGAGGTGGTCTTTGATTGCTGGGAGGATTCCTGGAAGAACAGATAATGAAATAAAGAACTATTGGAACACCCATCTAAGTAAAAAGCTCATTAGCCAAGGGATTGATCCCAGAACTCACAAACCTCTCAACCCACCATCCATGAATATCAATATTCCTTCTTCTTCTACTCCTTCTACTACTTTTACTGTCACTCCACCCTCTATGCCTCCTCCAATGATCATCACCAGCCACAACCCTTGTCATGATCTCACTCTTGTTAATCAAGGACTTCATGCGATTCATCATTTGGGTCAACACCTCCAACCTCCCGTTTCAAACCCCTTTGATAATAACAACATTAGCAATCAAGTGGCTGCTGTCACAGATGATGTTTCTGCAATGGGGTTCATGGACAGTGAGGATTGCAACGATGATATCAACATCAATTATTACTCAGATGATGTTTTTTCTTCCTTCCTCAACTCCTTGATCAACGAGGATGCTTTTGCGTCCCAGCAGCACCACGTGCAAACAGAGCTCCCCAGTGAGCGTTGCATTCCACTGCCGTGTGATGATCGTGTGGATGATCCTCTGGTTTCAATCACAACTGCTTCCACATCGCAGGGTTACGATGATGACCTTGGGGTTCTCTGGGAATCGCCTCTCGTGCCTTCTACTACTTTCACCCATCACGTTAACGATCCCATCATCAAGATGGCTCATGATCACCATCACCACAATCAATAG 729 0.4486 MRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPPSMNINIPSSSTPSTTFTVTPPSMPPPMIITSHNPCHDLTLVNQGLHAIHHLGQHLQPPVSNPFDNNNISNQVAAVTDDVSAMGFMDSEDCNDDININYYSDDVFSSFLNSLINEDAFASQQHHVQTELPSERCIPLPCDDRVDDPLVSITTASTSQGYDDDLGVLWESPLVPSTTFTHHVNDPIIKMAHDHHHHNQ 242
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00254 242 CDD SANT 2 26 IPR001005 -
Vian7g00254 242 PANTHER F14D16.11-RELATED 2 52 - -
Vian7g00254 242 ProSiteProfiles Myb-like domain profile. 1 26 IPR001005 -
Vian7g00254 242 Pfam Myb-like DNA-binding domain 2 26 IPR001005 -
Vian7g00254 242 Gene3D - 1 47 - -
Vian7g00254 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 30 IPR017930 -
Vian7g00254 242 MobiDBLite consensus disorder prediction 44 59 - -
Vian7g00254 242 MobiDBLite consensus disorder prediction 35 59 - -
Vian7g00254 242 SUPERFAMILY Homeodomain-like 2 35 IPR009057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian7g00254 Vian-Chr7 7581721 7582765 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00254 2 160 MYB Transcription Factor Family AT3G13540 41.509 1.71e-23 93.6
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian7g00254 Myb_DNA-binding 6.5e-06 CL0123