Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00219 ATGCGGCATTCCATGGAAGAGAACCCTAACCTCTCTCTCACTCACGATTCTTCCCTTTCCTCTCCGGAATTCTTCAAACAAGTCCAAGCTGCTCTCAAGCGCCATCGCCCTCTCGCCGTTAATGCCTCTTCAGCTTCAACCCAATCGCATACCCTGAGGCCAAAGCGCTCCATGGTGGCGCACCGAAACGTCGCAAACAGGTCCGAAGGGGAACCTCCGTCCATTTCGGACACGTTCACCGGTGAAGGTTGTAAGAACGAACCCTCTCTGCCCCTGGAATCTCATAGTGTTGGTGCGCACAAGAAGGTTCGTTTTTCAACCGAGAGCAACAATGCCACTTCACAGCCGCAGGATAGGGCATCAATTGGATTCAATCAACATGTGAAACACCACAATATGCAGCAGGCAGAGTCTGAGACTAGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTGCTTCCAAGGAGAAGAATAGTTACTGAGGATCATCTCCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACTATCTTCCGTAGTGGGATTGCCATGCCCTACAACTACGTCAGTCCATTCAACTTCAGCTCCAATGCCGAATTCTATAACTCATTGTGCCAATTCCTGTATGGATAGTGACTCGCATGTGGCTGCAGAACCTTATGATAACCTGAATGTCAATCCTCATCCTATAACACAAAGGGCTGTTAAATCACCATATGATTCTCTGAAAGACACCAATAGAATGTCAATTGATCAAGTGGCAAGTGCAGTTCAAGAATATAATTCACTAAATGAGGCAGAGATGACATTTAAGCACAGTGACCCATCTAAGGAGCAACAAGGATGTTTGCTAAAGGAAACTAGTAAATATACTTCTTGTTGTAATGTCATGTTAAGTAACACGGACAAGCCTGCAGCTGTTACCAACATACTGCCTCAGGGTCTGACTTCATCTTCAGATACAAAGCTGGAATCTTCTAGGTTAGAAAAGCAAGAAAAAAATGCAAGTTGTAAAGGACCTTCAGTCGCTCGAAAGAGGACCTATGACCCTGAGTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGAAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCAGACTGTACTATCTATGCACTTAAAAGAATAAAACTAAAGGGTCGTGATTATGCCACAGCATACAGCTTTTGTCAGGAGATCGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATGAATGGCTCCTCCAGTAGTAAAGATGGTAGAGTTAAGGATGATGGATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTAGATGGGAACAACCAGACTATAGATGCGAATTGGCTTCGGTTTTATTGGCAGCAAATTCTTCAGGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCATTAAAACTGATTGATTTCGGTATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAACGTGATTCACAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCCTTTATGTGCAATGAGAGTGATGCGAGTGGAAGCATCATGAAGTGTGGTCGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTATCAAATGGTATATGGGAGAACACCCTTTTCAGAATACAAGACATTTTGGGCCAAATTCAAAGTTATAACTGATCCCAATCACGAAATTATGTACGAACCAGTTTCAAATCCTTGGCTTCTTGATCTTATGAAAAAGTGTCTAGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAGTTGCTCCAGCATCCTTTTTTAGTTCCCCCAGTTCCATGTCATCAATCTTTGTTCCAAGATCAAACCTTTAAATTGCTGCAACTTATAGCTGAAACTTGCAAAAATGACCCAGAAGCATCGCAGCTCTGTTTTCAACTTCAACAGGTGCTTGATAATCCCATAAAATTAACTAGTACTCATTCATTAAACTCCCTAGACCAACAGCATAAATTACTGTCCCGAATATCAGAACTTTGTATTCAACTACAGAAACGCTTTCCAAATTCGGATGAAGAATAG 2220 0.4221 MRHSMEENPNLSLTHDSSLSSPEFFKQVQAALKRHRPLAVNASSASTQSHTLRPKRSMVAHRNVANRSEGEPPSISDTFTGEGCKNEPSLPLESHSVGAHKKVRFSTESNNATSQPQDRASIGFNQHVKHHNMQQAESETSLLSEGGKSSLLPRRRIVTEDHLQQFKNFLSQPATLSSVVGLPCPTTTSVHSTSAPMPNSITHCANSCMDSDSHVAAEPYDNLNVNPHPITQRAVKSPYDSLKDTNRMSIDQVASAVQEYNSLNEAEMTFKHSDPSKEQQGCLLKETSKYTSCCNVMLSNTDKPAAVTNILPQGLTSSSDTKLESSRLEKQEKNASCKGPSVARKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKRIKLKGRDYATAYSFCQEIEYLNRLKGKNNIIQLIDYEVTDKALFEGVMNGSSSSKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDANWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDASGSIMKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEIMYEPVSNPWLLDLMKKCLAWDRNERWRIPQLLQHPFLVPPVPCHQSLFQDQTFKLLQLIAETCKNDPEASQLCFQLQQVLDNPIKLTSTHSLNSLDQQHKLLSRISELCIQLQKRFPNSDEE 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00219 739 Gene3D Transferase(Phosphotransferase) domain 1 475 657 - -
Vian7g00219 739 MobiDBLite consensus disorder prediction 312 341 - -
Vian7g00219 739 ProSiteProfiles Protein kinase domain profile. 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00219 739 PANTHER MIXED LINEAGE PROTEIN KINASE 40 686 - -
Vian7g00219 739 MobiDBLite consensus disorder prediction 40 54 - -
Vian7g00219 739 Gene3D Phosphorylase Kinase; domain 1 354 440 - -
Vian7g00219 739 MobiDBLite consensus disorder prediction 69 83 - -
Vian7g00219 739 Pfam Protein kinase domain 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00219 739 FunFam serine/threonine-protein kinase mph1 isoform X2 354 441 - -
Vian7g00219 739 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Vian7g00219 739 SUPERFAMILY Protein kinase-like (PK-like) 355 662 IPR011009 -
Vian7g00219 739 FunFam serine/threonine-protein kinase mph1 isoform X1 475 657 - -
Vian7g00219 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Vian7g00219 739 SMART serkin_6 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00219 739 CDD PKc_Mps1 359 654 IPR027084 -
Vian7g00219 739 MobiDBLite consensus disorder prediction 37 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00219 Vian-Chr7 6754803 6767065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00219 327 655 MAP Kinase Kinase Kinase AT4G08470 28.818 2.51e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vian7g00219 Pkinase 7.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00219 K08866 - gmx:100816674 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00219 7 6754803 6767065 Vian7g00219 7 6754803 6767065 ECH