Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00199 ATGCATGTTCATCACAGAAACGTGGTTTCTCTTGTGGGATACTGTGATGAAAGTGATACTAAAGCACTTATTTATGAATATCTTTCAGAAGGGAACCTCCAACAAAAATTATCAGATAAGAACCCCATTTTTTTGGAATGGACGCAAAGACTTAAAATTGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGATGTCAGCCACCCGTAATTCACAGAGATTTGAAAACATCCAACATCTTACTAGATGAAAATATGCATGCCAAAATTTCAGACTTTGGGGTGTCTAAAACTTTTGCCAATGATAATGACACTTATGTCACAACTTACCCTGCAGGCACACCAGGTTACCTTGATCCTGAATTTTATTGCTCTGGGACACTCAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATCCTACTAGAGTTAATCACTGGTCAACCAGCACTAACAGGAACTTCAGAGAATCTCAGTTACATACTTCCTTGGGTTAACAATAAACTGAGAACAGGAAATATCCAAGAAATTGTTGATCGAAGGTTACATGGGAAATACAACGGTGCTTCAGCATGGAAATTTGTAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCTTAGAATTAAAGGACTGTTTGTCTCTTGAATTATCACTTGAAAGGACTGTGAGCAACGTGAGAGAGTCATTGGCCGTGAGTTCTAGGCAAATTGAATTCCATTAA 759 0.3887 MHVHHRNVVSLVGYCDESDTKALIYEYLSEGNLQQKLSDKNPIFLEWTQRLKIAMDAANGLDYLHNGCQPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDNDTYVTTYPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALTGTSENLSYILPWVNNKLRTGNIQEIVDRRLHGKYNGASAWKFVGIAMSCLPQVPIHRPDIGHIALELKDCLSLELSLERTVSNVRESLAVSSRQIEFH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00199 252 Pfam Protein tyrosine and serine/threonine kinase 2 162 IPR001245 GO:0004672|GO:0006468
Vian7g00199 252 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00199 252 PANTHER OS07G0107800 PROTEIN-RELATED 1 225 - -
Vian7g00199 252 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 28 235 - -
Vian7g00199 252 SUPERFAMILY Protein kinase-like (PK-like) 2 218 IPR011009 -
Vian7g00199 252 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00199 252 Gene3D Phosphorylase Kinase; domain 1 1 28 - -
Vian7g00199 252 Gene3D Transferase(Phosphotransferase) domain 1 29 242 - -
Vian7g00199 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00199 Vian-Chr7 6319565 6326146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00199 1 251 Receptor kinase-like Gene Family AT2G28970 50.397 1.55e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vian7g00199 PK_Tyr_Ser-Thr 4.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00199 - - vra:106763618 362.459