Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00198 ATGGAAGACTTATGTGGAGCCAAGGTTGGCAACATGGTACATAAGGCCAAGCCATATGTGTTAACTGTGGGGTTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTCGTCTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCCCTTGCTCCCTTTGCCTTGATATTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACTGTGTTCCTGCAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGTTTTACTTTCTTGGGGATGCAATACACTTCTGCTTCCTTTGCATCTGCTGTTATGAATGCCGTACCCTCTGTAACCTTTGTGCTTGCACTATTTCTCAGGTTAGAGCGGGTAAACATGAGGGAACTACGTAGCCAGGCGAAAGTGGTGGGAACCTTGGTGACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGCCCTCAATTTGACCTATTTCATCACTCAAAGACAACTCACCAACAAAGTGGAAGCCAATCCTCTCAGAATAATCACTCTCACTGGGTCTCAGGAACTCTCTTCATTTGCCTGGGTTGTCTCGCTTGGTCTTCCTTCTACATACTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTGTCACTGTCATCGTTGATATGCTTGGGAGGTGCATTGCAAAGTGCTGTGGTTGCTGTGATTGCAGATCGCAACCCTCGTGCATGGGCTATCGGTTTCGACTACACCCTCTATGGCCCTCTATACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAGGGGTTGGTAATGCAGAGCAGAGGTCCAGTATTTGTGACATCCTTCAATCCTCTTTGCATGATCATTGTTACTGCTTTGGGCTCCCTTCTTCTTGGAGAGCACCTCTACCTTGGAAGTATCATTGGAGGCATGATTATCGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGCAAAGATTATGGAGATGAGACGTCATCATCACCAGGAAGAATAAAAGAAACAGAAACAATGCAGCTCCCAGTTAGCTCAATAAATAACAAATGA 1098 0.4554 MEDLCGAKVGNMVHKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRFVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFLQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLALFLRLERVNMRELRSQAKVVGTLVTFAGALLMTLYKGPQFDLFHHSKTTHQQSGSQSSQNNHSHWVSGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICLGGALQSAVVAVIADRNPRAWAIGFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGMIIAVGLYSVVWGKGKDYGDETSSSPGRIKETETMQLPVSSINNK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00198 365 PANTHER WAT1-RELATED PROTEIN 17 338 IPR030184 GO:0016020|GO:0022857
Vian7g00198 365 MobiDBLite consensus disorder prediction 348 365 - -
Vian7g00198 365 MobiDBLite consensus disorder prediction 338 365 - -
Vian7g00198 365 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Vian7g00198 365 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Vian7g00198 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Vian7g00198 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00198 Vian-Chr7 6301436 6304121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00198 10 365 Nodulin-like Gene Family AT4G08300 47.339 7.36e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00198 - - gmx:100777641 615.15