Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00141 ATGGTTCAGAAAAGACCGTATTATTGCCTTGTTATGCTCTTTGTGTTGGGCATTAGTTTTGAGCCATCGTTGGGAGACACAGATGCTCAAATTTTGATGAGGTTCAAAGGTTCCTTGTCAAATGGGAAAGCCTTAAACGACTGGGGGAGCGAGTCCAGTTTATGTAGCTGGACTGGCTTGTTATGCCGCAAAAACCAAACATTTTATGGCTTGAGACTAGAACATATGGAAATGGGTGGGAAGATTGATATAGAAACCTTGGTTGAATTGCCAACTTTGGTAAGCTTTAGTGTCATTAACAATACATTTGAGGGTCCGATGCCGGAGTTCAAAAAACTTGTGAGTTTAAGGGCATTGTTTCTGTCCAATAACAAGTTTTCCGGTGACATTCCAGATGATGCTTTTGAAGGCATGAGAAAACTGAAGAGGGTATTCTTGGCAGAAAATGGTTTCACTGGTCCTATTCCAAAGTCACTTGCTAACTTGCCAAGACTCTTGGATTTGGACTTACGCGGGAATGGTTTTGGAGGAAACATACCAGATTTTCAACAGCAGGATTTTAGAGTATTTAATTTGTCAAATAACCAATTGGAGGGTCAAATACCAGAAAGCTTAAGCAACAAGTTTCCAAGTTCATTTGCTGGCAACGAAGGCCTGTGTGGAAAACCTTTAAGTTCCTGCAAGATTGGCGGCAACGAATCTAGATCACTGGAACCAAACCTTGATAAACCTCAGGGAAAAAACCACAGAATCCTTATAACTGTCATTATAGTCGTAGCAGTTGTTGCTTTTTCTTCAATAGTTGCACTTCTATTTATCCAGAAACACAGGAGAAAAAGGTTTAAACCCAGAACATTACCGACGCAGGGAAATTCCCAGCAAAGTGTAGGCTTCAAGGAGTCACACTCCATTGATATGACAGTTGATTTGAAAGATGGAGATGGCGAATTGAACTTTGTTAGGGAAGACAGAGGAGGATTTGATTTGCATGAGCTGCTTAGTGCCTCAGCAGCCGTTCTTGGTAGTGGAAGTTTCGGGTCCACTTACAAGGCTATGATTCTGAATGGACCAACAGTGGTTGTGAAGAGGTTTAGGCACATGAACAATGTTGGGAAACAGGAGTTTAGTGAACACATGCAAAGGCTTGGAACTTTAACACACCCTAATCTTCTCCCTCTTGCAGCATTCTACTACAGAAAAGAAGATAAGTTCTTGGTTTATGACTTCGCCGAAAATGGTAGCTTGGCCAGTCATCTACACGGCAGAAATGGCTCTGTTCTTACTTGGTCCAGCCGTTTAAAAATCATAAAAGGGGTGGCTAGGGGCTTAGCCTACCTGTATGAAAACTTTCCAGGAAAAATCGTACCTCATGGTCATCTGAAATCCTCTAATGTGGTGCTGGATCATTCATTTGAGCCAAAGTTGAATGAGTATGGCCTTGTGGAAGTGATGAATAAGAGCCATGCTCAGAAGTTCATGGCAGCCTACAAGGCCCCAGAGACGAGCAAATTTGGTAGGCCAAATGTGAAAAGTGATGTGTGGTGTCTGGGGATCCTGATTTTGGAGGTGCTGACAGGGAAGTTCCCAGCAAATTATCTGAGACATGGGAAGGGTGGGAATAATTCTGACTTGGCAACATGGGTGGATTCAGTTGTGAGGGAAGAATGGACTGGTGAGGTGTTTGATAAGGACATCTTGGGGACTAGGAATGGGGAGAGTGAGATGCTGAAGCTGCTCAGGATTGGAATGTTTTGTTGCAAATGGAGTGTGGAGAATAGGTGGGATTGGAATGAGGCAGTGGCAAAGATTGAGGAGGTGAAGGAGAATGATGGTGAGGATGATTCTTCTTCTTGTTATTATGTCAGTGAAGAGGATTTCAATTCAAGGACTGCGACTGAAGATGAGTTCTCTTTCTCTGTCACTAATGGATGA 1932 0.4286 MVQKRPYYCLVMLFVLGISFEPSLGDTDAQILMRFKGSLSNGKALNDWGSESSLCSWTGLLCRKNQTFYGLRLEHMEMGGKIDIETLVELPTLVSFSVINNTFEGPMPEFKKLVSLRALFLSNNKFSGDIPDDAFEGMRKLKRVFLAENGFTGPIPKSLANLPRLLDLDLRGNGFGGNIPDFQQQDFRVFNLSNNQLEGQIPESLSNKFPSSFAGNEGLCGKPLSSCKIGGNESRSLEPNLDKPQGKNHRILITVIIVVAVVAFSSIVALLFIQKHRRKRFKPRTLPTQGNSQQSVGFKESHSIDMTVDLKDGDGELNFVREDRGGFDLHELLSASAAVLGSGSFGSTYKAMILNGPTVVVKRFRHMNNVGKQEFSEHMQRLGTLTHPNLLPLAAFYYRKEDKFLVYDFAENGSLASHLHGRNGSVLTWSSRLKIIKGVARGLAYLYENFPGKIVPHGHLKSSNVVLDHSFEPKLNEYGLVEVMNKSHAQKFMAAYKAPETSKFGRPNVKSDVWCLGILILEVLTGKFPANYLRHGKGGNNSDLATWVDSVVREEWTGEVFDKDILGTRNGESEMLKLLRIGMFCCKWSVENRWDWNEAVAKIEEVKENDGEDDSSSCYYVSEEDFNSRTATEDEFSFSVTNG 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00141 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 613 IPR046959 -
Vian7g00141 643 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Vian7g00141 643 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Vian7g00141 643 Pfam Protein kinase domain 338 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00141 643 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Vian7g00141 643 Gene3D Phosphorylase Kinase; domain 1 313 409 - -
Vian7g00141 643 ProSiteProfiles Protein kinase domain profile. 334 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00141 643 Gene3D Ribonuclease Inhibitor 188 227 IPR032675 -
Vian7g00141 643 FunFam Pollen receptor-like kinase 1 410 617 - -
Vian7g00141 643 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Vian7g00141 643 Gene3D Transferase(Phosphotransferase) domain 1 410 626 - -
Vian7g00141 643 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Vian7g00141 643 SUPERFAMILY L domain-like 48 216 - -
Vian7g00141 643 SUPERFAMILY Protein kinase-like (PK-like) 338 605 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00141 Vian-Chr7 4997876 5000446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00141 6 628 Receptor kinase-like Gene Family AT5G35390 46.260 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian7g00141 Pkinase 2.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00141 - - gmx:100781593 988.793