Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00132 ATGACTGAACTCCGAAGCGGAAGAAACTGGGCAACGTTCCATGATCCAAACCCAAACCCAAACCCAAACCCAAACCCGAACACAAAAGCCCGCCAGAGAAGAACGAGAAGAACTGCTGTCAACACCGGGAGGTACAATCGCAACACACTCGCGCGTTGTAGAATCGGTAACCGTGAATTAGGAGAGAAGGAGCAACAACAGCAACCCGCGCCTCTGCTTAGGGTTTCGGAAGAAGATAAAGAGAAAGAGATGGATGACGAGTTCGATAGCGGCGGTGGCCGGAGCCCCGACAAGGCTGCGCCTGCCGAAGACGAAGGAAGCACTGCTCCCATTCCCGAGAGGGTACAGGTAGGTGGTTCTCCGTTGTACAAATTAGACAGAAAGCTTGGGAAGGGAGGGTTTGGACAAGTTTACGTAGGTAGGCGAGTTGGGGCTGGTGCCGGAGCGTTAGAGGTAGCTTTGAAGTTTGAACATAGAAGCAGTAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAAGTTTACAATGTATTGGGTGGTAGTCATGGTGTTCCACGTGTTCATTACAAGGGACGGCAAGGTGATTACTATGTTATGGTCATGGATATGCTTGGCCCTAGTCTGTGGGATGTCTGGAATAACAACTCAAACACAATGTCTGCGGAAATGGTGGCATGTATAGCAATTGAGGCCATCTCCATATTAGAGAAGATGCATTCTAAAGGGTATGTGCACGGTGATGTAAAACCTGAGAATTTTTTGCTTGGCACCCCTGGAACTGCTGATGAGAAAAAGCTTTTCCTAGTTGATCTTGGATTAGCAACCCGTTGGCGTGATAGTTCAACTGGCTTTCATGTTGAGTATGATCAACGTCCTGATGTATTTAGAGGAACAGTTCGATATGCTAGTGTGCATGCTCATCTGGGTAGAACAGGAAGCAGGAGAGATGATTTGGAATCTCTTGCTTACACATTGATTTTCCTTCTTCGTGGCCGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTGTGCAAGAAAAAGATGGCAACCTCACCAGAAGCTTTGTGTTGTGTCTGTCCTCCCCCATTCCGGCAGTTTGTGGAATACGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCTAAGTATATATCACTTTTTGATGGAATTGTTGGACCGAATCCAGATATCAGACCCATAAATACCGAAGGTGCACAAAAGCTTATAAATCTGGTTGGACATAAGAGAGGACGATTAACTGTGGAAGAAGATGATGATGAACAACCAAAGAAGAGAGTAAGAATGGGAATGCCAGCAATGCAATGGATTAGTGTGTACAATGCCCGCCGACCAATGAAGCAAAGGTACCATTACAATGTTGCTGATGTGCGGCTGTCCCAACACATTGAAAAGGGATATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTTCTAACCTATGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCTCAAGTTCATGAACTCTCACCCCACTTCCTTCATAAGGAATGGATTATGGAACAGTGGGAAAATAATTATTACATTAGTGCAATAGCAGGCTCTAACAATGGGAGCTCATTGGTTGTAATGTCTAAAGGGACCCAATACATGCAGCAATCCTATAAAGTTAGCGAGTCATTTCCATTTAAGTGGATCAATAAAAAATGGAGAGAAGGATTTTCTGTCACTGCTATGGCTACTGCTGGGAGTAGATGGGCAATTGTAATGTCCCGTGGTGCTGGATATTCAGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGCATTCATCGCAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCCACCTGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCGGCTGATGAAACTCAAGAGACACTCCGCACATCTGCCTTTCCTAGTAGTCACGTCAAGGAAAAATGGTCAAAAAATCTCTATATTGCATCAATATGCCATGGGAGAACAGTTTCATGA 2052 0.4522 MTELRSGRNWATFHDPNPNPNPNPNPNTKARQRRTRRTAVNTGRYNRNTLARCRIGNRELGEKEQQQQPAPLLRVSEEDKEKEMDDEFDSGGGRSPDKAAPAEDEGSTAPIPERVQVGGSPLYKLDRKLGKGGFGQVYVGRRVGAGAGALEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSNTMSAEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGTPGTADEKKLFLVDLGLATRWRDSSTGFHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCVCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLINLVGHKRGRLTVEEDDDEQPKKRVRMGMPAMQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVHELSPHFLHKEWIMEQWENNYYISAIAGSNNGSSLVVMSKGTQYMQQSYKVSESFPFKWINKKWREGFSVTAMATAGSRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSSHVKEKWSKNLYIASICHGRTVS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00132 683 ProSiteProfiles Protein kinase domain profile. 123 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00132 683 PANTHER CASEIN KINASE-RELATED 118 651 - -
Vian7g00132 683 FunFam casein kinase 1-like protein HD16 96 439 - -
Vian7g00132 683 MobiDBLite consensus disorder prediction 1 118 - -
Vian7g00132 683 MobiDBLite consensus disorder prediction 74 101 - -
Vian7g00132 683 Pfam Protein kinase domain 123 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00132 683 CDD STKc_CK1 123 392 - -
Vian7g00132 683 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Vian7g00132 683 Gene3D Transferase(Phosphotransferase) domain 1 98 420 - -
Vian7g00132 683 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00132 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Vian7g00132 683 MobiDBLite consensus disorder prediction 1 16 - -
Vian7g00132 683 SUPERFAMILY Protein kinase-like (PK-like) 123 396 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00132 Vian-Chr7 4813103 4817362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00132 122 278 EF-hand Containing Proteins AT2G17290 30.675 8.48e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Vian7g00132 Pkinase 4.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00132 - - vum:124819781 1144.03