Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00130 ATGGGTCGTTTATCAGAGTCGAAGTTGGTTCAAGAACTTGTTCTGTACGCTGCTAGCGCAGCACTGAGTTGCTTGGTCTTGTTTGTTGGTCTCCGACAACTCGACCCGAATCGCGAGGCTTCCAAAAAGGCCCTTCACCACAAAAAGGAGATAGCCAAACGCCTTGGTCGTCCTCTTGTTAACACAAACCCTTACGAGGATGTCATAGCATGCGATGTTATCAATCCTGACCACATTAATGTGGAGTTTAACTCAATCGGAGGACTGAAAACGACAAAACAAGCCCTATATGAACTTGTTATTCTGCCTCTAAGAAGACCTGACTTGTTTTCTCATGGTAAACTTCTTGGGCCACAAAAGGGTGTCCTTCTGTATGGACCCCCTGGCACGGGGAAGACCATGCTTGCCAAAGCTATTGCTAAGGAGTCTGGAGCAGTTTTCATCAATGTTAGGATATCAAACCTGATGAGCAAGTGGTTTGGAGATGCCCAGAAACTTGTGACTGCCATATTTAGCCTAGCTCATAAGCTCCAGCCTGCCATCATATTCATTGATGAAGTTGACAGCTTTTTGGGTCAGCGTCGTCAAACAGATCACGAGGCTTTGTTAAACATGAAAACTGAATTCATGGCTCTGTGGGATGGTTTTACTACTGATAAGAATGCTCAAGTTATGGTCCTTGCTGCTACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGACGACTTCCTCAAGCATTTGAAATTGGTATTCCGGACCAAAAGGAGAGGGCTGACATATTGAATGTTATCTTGAAGGGTGAGAGGATTGAAGAAAACATTGATTTTGACCATATAGCTTTCTTATGTGAAGGTTACACTGGTTCGGATCTATTTGACCTGTGCAAGAAAGCTGCATATTTTCCAATTAGAGAACTTCTGGATGAAGAGAAGAAAGGGAGAAGTGTTTCTGCTCCTAGACCATTGTCCCAGGTAGACTTGGAGAAGGCCCTGGCCACATCACGAAAGACTACTGATGCTGCATTTGAATACAATGGATTAAGTGCTGATACTCTAAGATGGGCAAGGCAGAGGGAACCTGGTGGTGATTATCAGGTTCAAGCTGCCATTAATGAACTCTCTAAGTTTGTGGTATCTCACATGACTAGTCGCCAGCCAGATGCCAAAGATGTTTAA 1179 0.4402 MGRLSESKLVQELVLYAASAALSCLVLFVGLRQLDPNREASKKALHHKKEIAKRLGRPLVNTNPYEDVIACDVINPDHINVEFNSIGGLKTTKQALYELVILPLRRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAIFSLAHKLQPAIIFIDEVDSFLGQRRQTDHEALLNMKTEFMALWDGFTTDKNAQVMVLAATNRPSELDEAILRRLPQAFEIGIPDQKERADILNVILKGERIEENIDFDHIAFLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGRSVSAPRPLSQVDLEKALATSRKTTDAAFEYNGLSADTLRWARQREPGGDYQVQAAINELSKFVVSHMTSRQPDAKDV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00130 392 Gene3D - 253 333 - -
Vian7g00130 392 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vian7g00130 392 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Vian7g00130 392 CDD RecA-like_ATAD1 85 250 - -
Vian7g00130 392 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 8 365 - -
Vian7g00130 392 SMART AAA_5 118 254 IPR003593 GO:0016887
Vian7g00130 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 337 IPR027417 -
Vian7g00130 392 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Vian7g00130 392 Pfam AAA+ lid domain 274 310 IPR041569 -
Vian7g00130 392 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Vian7g00130 392 Gene3D - 80 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00130 Vian-Chr7 4748528 4754892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00130 81 312 Calmodulin-binding Proteins AT3G56690 33.613 1.50e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00130 K22530 - gmx:100791694 702.59