Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00128 ATGGGGAGAAAAGGAAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGACTTGCCAGGGCCTGAGAAGAAGAAAGATAGCACACAGAAATTACAGCATGAAGTGGCAGAGGTGGTTTCTTTTGAGCATTTCCCAGTAGAGAGTTCTCCAGATAATAATGTGACAAATGAAGAGAGTGGCACTTCAACTCCATTTACAGAAGATAGAAGCCACGCCATTGCCGTTGCAGCAGCAACTGCCGCCGCTGCTGAAGCTGCCGTGGCGGCTGCTCAAGCAGCTGCAAGAGTGGTGAGATTGGCCGGTTATGGACGCCACTCCAAGGAAGAAAGAGCAGCAATACTCATTCAATCATACTACAGAGGCTATTTAGCTCGACGAGCACTGCGAGCACTGAAGGGATTGGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGAGAAAGCAAGCCCAAATGACGATGCGATGCATGCAAGCACTGGTGAGGGTGCAGGCACGAGTAAGGGCTCGCCGACTCCAATTGAGTCACGTCGACGACGAAAGACAACAGTATGAGAAGATGGAAGAGCCCGAGCCCAAGCCCAAACCCATGCCCATGAGTCCCATGAGAAGGACACCCATCAATAATGATTGGGACAACAGGCGTCAAAGTAGCTACAAAATTAAGGAAAACGATTTGAGGAAACATGAGGCTGCAATGAAGAGGGAGAGAGCTCTCGCATACGCTTTCAACTTTCAACAGCAAGAGCAGCAAAAACAATATTTACTGGCTGAATCGAAGGGTAAGGATGATATAGGAATAAAGGAAAAAGGGCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAGCCATACAATGTGAGGAACATGGGACCACGTGAGACCTCTTACATTACTCCTGCTTCTACAACGTCAACCACCACAGATAACATGTCTGAGAAGACCGTGGAAATGGATATGATTGCAACTCCAGGCCCAACCAATGTCAGAAGCATCAGTCCCATAAACCTAGACTTTATTGATTCAAGCCCACTCTCCAATAGGCACAATTATCACATACCTCCAAGCCCAAATAGACGCTATATGGCCCCAACTCAGTCTGCAAAAGCCAAGGTTCGGGTTCAAGGCCCATCTAAACCTCGGGTATCAACTGGGCCTCAGTGGAACTCCTCAACTAAGGGAGGATCCACCTGTGACTCGTCCAGTTCAGGTGGAGGAATCACCGCTTACCAAATTCCAAGAAGTCCAGGCCCAAAAATTAATGGCATTCGATCACAGTCCAGAAGGACTGTTGGTAGCAGTCCAGATTATATTGAGGATTGGGCCCTTCCTCTTGGAGCCCATGGTTGGACTTAA 1377 0.4844 MGRKGSSWFSSVKKVFKSSSKDLPGPEKKKDSTQKLQHEVAEVVSFEHFPVESSPDNNVTNEESGTSTPFTEDRSHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVDDERQQYEKMEEPEPKPKPMPMSPMRRTPINNDWDNRRQSSYKIKENDLRKHEAAMKRERALAYAFNFQQQEQQKQYLLAESKGKDDIGIKEKGQWGWNWLERWMSSQPYNVRNMGPRETSYITPASTTSTTTDNMSEKTVEMDMIATPGPTNVRSISPINLDFIDSSPLSNRHNYHIPPSPNRRYMAPTQSAKAKVRVQGPSKPRVSTGPQWNSSTKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRTVGSSPDYIEDWALPLGAHGWT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00128 458 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Vian7g00128 458 Pfam Protein of unknown function (DUF4005) 351 396 IPR025064 -
Vian7g00128 458 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Vian7g00128 458 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Vian7g00128 458 SMART iq_5 112 134 IPR000048 GO:0005515
Vian7g00128 458 SMART iq_5 135 156 IPR000048 GO:0005515
Vian7g00128 458 MobiDBLite consensus disorder prediction 51 71 - -
Vian7g00128 458 MobiDBLite consensus disorder prediction 184 217 - -
Vian7g00128 458 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Vian7g00128 458 MobiDBLite consensus disorder prediction 20 37 - -
Vian7g00128 458 MobiDBLite consensus disorder prediction 184 198 - -
Vian7g00128 458 MobiDBLite consensus disorder prediction 379 443 - -
Vian7g00128 458 Coils Coil 224 244 - -
Vian7g00128 458 Gene3D - 110 164 - -
Vian7g00128 458 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Vian7g00128 458 MobiDBLite consensus disorder prediction 16 37 - -
Vian7g00128 458 MobiDBLite consensus disorder prediction 387 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00128 Vian-Chr7 4721087 4727109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00128 1 426 IQD Protein Family AT3G49260 50.109 1.86e-101 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00128 - - gmx:100798026 592.808