Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00125 ATGGCGGAGTCTAGTGTGCTACCTCTCCAAGGTGAGTCCTTATTGATAACACTACTGTTAATGTTCTTGCTTATTGTAAGTAGCAGCGGTGAAAAAGAGTGCTCGGAATTGCCTAATTGTGGGTCTAAAGAACCGCCTATTAGATTTCCCTTCCAACTCGTCCAGGGGATGAAAGATGCATGTGATTCTCCTGGTTTGTGTGTATATTGTAGTGAAAATAAGGAGACCATGCTTCTTCACCCTACAGTAAAACTCCGTGTCACAGATATACACTACAAATTTCAGATTATTTACTTGAACGATTCAGAAAATTGCCTTCCGAAGAAGTTTCTAAACCTCAACAATTTTACGATTCCTCCTTACCAACTTGGTTCATCATATGAACCACAAACAAACTACTTGAATTTCTTCGATTGTTCTTCACTTGGACTTCCACACCTCAGAAACAGAGACCAGACATACTCGAGTTCGCAAGACATGATTCGTTGTCCGACTTACGTTTCTAACTCTGACGAAAGTGTCCTTGAATTGGACCTAACATCTTGTTCCAAGATGTTCAACATCATTTCGCAGGCCTCGGCATCTGACCTGCGGAGGAATTGGTTGAATTTGAGATGGTCCGAACCAAACTGTGGTGAGTGCGAAGCAAAAGGCAATAGATGTAAATGGAAGACGAACAGCACAACGGAAATCGAATGTGTAGACTGCAGTCCCAAACGACACATTCACATTCACAAATATTCTATTTTCACTGCTACAGGTTCTATTGTTTTGGGGCTGGTGGTTATTGCAGTGTTTAAGATGGTGCACCATTTTAAAAAGAAAGAAGAAGACCAAGCTAGAGTGGATAAGTTTCTAGAGGATTACAGAGCAGACAAGCCTGCAAGATTTACCTATGCTGATGTAAAAAGAATCACTGGTGGTTTCAAAGAAAAGTTAGGGGAAGGAGCTCATGGAGCTGTGTTTAGAGGAAAACTTTCAAATGAGATTCTCGTGGCTGTGAAGATCCTCAATAATACGGAGGGAGATGGGAACGATTTCATCAATGAAGTTGGAATTATGGGAAAAATTCACCACATCAACGTGGTTCGTTTGCTTGGTTTTTGTGCTGAGGGACTCCATCGGGCTCTTGTCTACAATTTGTTTCCAAACGGTTCGCTACAGAGTTTCATATTTCCACCGGATGACAAGGACCATTTTCTTGGCTGGGAGAAGCTGCAACACATTGCTCATGGCATTGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCGTCCCATTATTCACTTTGACATCAACCCTCACAATGTGTTACTCGATGAAAACTTCATCCCGAAAATTTCTGACTTTGGCTTAGCCAAATTGTGTTCAAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCAGAAGTTTTCTCCAGAAACTTTGGAAATGTGTCTTATAAATCCGATATCTACAGTTATGGAATGTTATTGTTGGAAATGGTTGGAGGAAGGAAGAATGTTGACATATCTTCAGCACAAAATTTTAATGTTCTGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATATCCATATCCATGTTGAGGATGAAGGTGAAGTTAAAATTGCAAAGAAACTGGCAATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACAGACCATCCATAAAATCTGTCATACAAATGTTAGAAAGTGCAGAGGAAAACCAGTTAACTGTTCCTCCTAACCCATTTCACTCAACGTCCTCCACTTCTACTGGTAGACTCATTTCAACAAGACGTCCTATGGAGTTGGATGTGATTCAAGAATGA 1851 0.4122 MAESSVLPLQGESLLITLLLMFLLIVSSSGEKECSELPNCGSKEPPIRFPFQLVQGMKDACDSPGLCVYCSENKETMLLHPTVKLRVTDIHYKFQIIYLNDSENCLPKKFLNLNNFTIPPYQLGSSYEPQTNYLNFFDCSSLGLPHLRNRDQTYSSSQDMIRCPTYVSNSDESVLELDLTSCSKMFNIISQASASDLRRNWLNLRWSEPNCGECEAKGNRCKWKTNSTTEIECVDCSPKRHIHIHKYSIFTATGSIVLGLVVIAVFKMVHHFKKKEEDQARVDKFLEDYRADKPARFTYADVKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGDGNDFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNLFPNGSLQSFIFPPDDKDHFLGWEKLQHIAHGIAKGIEYLHQGCDRPIIHFDINPHNVLLDENFIPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDISSAQNFNVLYPDWIHNLVDGDIHIHVEDEGEVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLESAEENQLTVPPNPFHSTSSTSTGRLISTRRPMELDVIQE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00125 616 FunFam S-receptor-like serine/threonine-protein kinase 273 381 - -
Vian7g00125 616 Gene3D Transferase(Phosphotransferase) domain 1 382 589 - -
Vian7g00125 616 SUPERFAMILY Protein kinase-like (PK-like) 291 577 IPR011009 -
Vian7g00125 616 Pfam Wall-associated receptor kinase galacturonan-binding 34 101 IPR025287 GO:0030247
Vian7g00125 616 ProSiteProfiles Protein kinase domain profile. 307 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00125 616 Pfam Protein tyrosine and serine/threonine kinase 309 576 IPR001245 GO:0004672|GO:0006468
Vian7g00125 616 Gene3D Phosphorylase Kinase; domain 1 279 381 - -
Vian7g00125 616 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Vian7g00125 616 FunFam PR5-like receptor kinase 382 587 - -
Vian7g00125 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 279 595 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00125 Vian-Chr7 4681258 4683200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00125 10 590 Receptor kinase-like Gene Family AT5G38260 34.839 2.21e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vian7g00125 PK_Tyr_Ser-Thr 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00125 - - gmx:100813531 894.419