Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00107 ATGGAGATTGACCCTTGTGGGGTTCCCTTTCGTGGTTCTACTTGTGATCCCTGGTTTTATGTATGGGAGGACACTAATGGGGTTGGCCAGCAAGATGAGAGAAGAATACGACAAGGCTGCAAAACCATAGATGCTTTCTTTGATGCTCTACAAGGTTCAGTAAAGTTAGGACTCAGACAAGGCTTGGCAAAAGGCATAGCTATCAGAACCAATGATGAAGATCTTGTTAGTTTCTATCTACAAAGGAAGCTTCACAAGAAACCCATCAGCATCGACCTCATCAACCAAATTGATATTTACAAATACGATCCTTGGGATCTTCCAAAATTGCTCTGGCATATTTGGTTGTGGCACTTGTGGAGATATTTTCAAGAAGTGCACAAGATCGATCCACCCACCCAACTCTCAATATTGAAGTTGTACTATTGGCATTGGCAAGTGGGGGCTTGCATACTTGCTGTTTACTTGGCTTTACTTTATGGAATGCACGTTGGTGAACGACGCTGCGATCACAATCACGGTCTTGCCGTGGTCAACTTTCCCACCACACTGCCACAAGTATACACTCAGACTTGTCGCTCCCGGTGGCGCCGACAGAGGAAGGAACGATCGCGCCAGCAGAGGAAGGAACGCCGCGCCAGTGAAGTCGCTGCCTACCTCGAGGATGTGTGCGCGGAGCGTGTTGGCGCTCTCCCTGGTGATGTTCAGCAGTGGCTTCGCCTTGTTCTTGGATCCCAGCAGCCGCTCTCGCGGATTTCTGAAGTTTCTTCCCTTTTCCGTTTTTGTTTCTTCCACTACTCTGAAGAAGAAACCCTAAAGAAGGTTTGGGCTTGGCCCATTTTGAAGAAAACCTAA 855 0.4772 MEIDPCGVPFRGSTCDPWFYVWEDTNGVGQQDERRIRQGCKTIDAFFDALQGSVKLGLRQGLAKGIAIRTNDEDLVSFYLQRKLHKKPISIDLINQIDIYKYDPWDLPKLLWHIWLWHLWRYFQEVHKIDPPTQLSILKLYYWHWQVGACILAVYLALLYGMHVGERRCDHNHGLAVVNFPTTLPQVYTQTCRSRWRRQRKERSRQQRKERRASEVAAYLEDVCAERVGALPGDVQQWLRLVLGSQQPLSRISEVSSLFRFCFFHYSEEETLKKVWAWPILKKT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00107 284 ProSiteProfiles NAC domain profile. 62 219 IPR003441 GO:0003677|GO:0006355
Vian7g00107 284 SUPERFAMILY NAC domain 60 123 IPR036093 GO:0003677|GO:0006355
Vian7g00107 284 Gene3D NAC domain 71 128 IPR036093 GO:0003677|GO:0006355
Vian7g00107 284 Pfam No apical meristem (NAM) protein 65 109 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00107 Vian-Chr7 4311735 4315411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00107 62 110 NAC Transcription Factor Family AT1G26870 61.224 1.49e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00107 - K17756 gmx:100808692 72.4034