Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00095 ATGAAATGGTGTGGCACTGACGCGGACAATAATGTTCTTGTTATTGAACTTCTGGGACCAAGTCTTGAAGATCTCTTTTACTTCTGTGGCAATAAATTATCTCTCAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACACGGATAGAATATATACATTCCAAAGGATTTTTGCATAGAGACATCAAACCCGATAACTTCCTTATGGGTCTCGGAAAGAAAGCAAATCAGATTTACATGATTGACTTTGGACTAGCAAAAAGATACAGGGATCCCATCACAAATAAGCATATCCCTTACAGAGAAAACAAAGGTTTAACAGGGACTGCCCGTTATGCAAGTTACAATACTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGTCTTCCATGGCAAGGTTTGCAAGCTGCCACCAAAAGACAAAAGTATGATCAAATTTGCAAAAAGAAGTTATCAACGCCCATTGAGGTACTTTGCAAGTCATATCCTGTGGAGTTTGCCTCTTACTTTCATTATTGTCGCTCTTTGACATTTGATCAACGACCAGATTATGGTCTTTTGAAGCGTTTCCCATGGCCGCATCGTCGTTGTCCCACCCCCAAACCTGTCACGCCTCCCACCCCCGCAACCCTAACCCCACCACCAATCAGAACCGCCAACGGACGCGATCTCGCTCCGCCAACGGACGCGATCTCGCTCCGCCACGGGAAGCGATCTGGACGCGATTTTGCTCCGGCACCGGACGCGATCTGGACACGATATCGATCCGCCATCGGACGCGATCTGGACGCGATCTTTCTCCGCCATCGGACGCGATCTCGCTCCGCCACCGGACGAGATCTGGACGCGATCTCGCAACGCCACCGGACGCAATCTGGACACGATTTGGCTCCGCCACCAGACGCGATCTCGCTCTACCACCGGACGCGATCTGGACGCGATCTGGCTCCGTCATCGGATGCGATCTCTCTCCTCCACCGGATGCGATCTCGCTCTGCCCCCTCGTCGAACTGGCACCGCTTCCTTGCTGTCGTCTCCGCCCCCCAAGCTCGACAAGTTTGTTCCGCCGCACCTCTGGCCTGGGTTCGTGCCCCAGGAGAAGACCCACCTGGGCCGGGTTCTTTCTTTATCAATTGTTTTGGGTTTGATAGTTGTCGTTTTGTGGTTGTAGGCATCACCAACACCATTGAAAATATTGTTCAATTTTTTTCCAGAGTTTTGCTACTTGTCCATGGAGTGCGGTTGTCCAATTGGCTAATACAAGATGGCAGCCCATCACTATATGGAGTGGTTCATGAAAGGCTCCTTGCTATGTACATTTGTGCTGGTCATGGAATTGAGGCAGAGAAACAGTTGAGGGAGATGAAGCTTTGGAGATGA 1425 0.4905 MKWCGTDADNNVLVIELLGPSLEDLFYFCGNKLSLKTVLMLADQMLTRIEYIHSKGFLHRDIKPDNFLMGLGKKANQIYMIDFGLAKRYRDPITNKHIPYRENKGLTGTARYASYNTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATKRQKYDQICKKKLSTPIEVLCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRFPWPHRRCPTPKPVTPPTPATLTPPPIRTANGRDLAPPTDAISLRHGKRSGRDFAPAPDAIWTRYRSAIGRDLDAIFLRHRTRSRSATGRDLDAISQRHRTQSGHDLAPPPDAISLYHRTRSGRDLAPSSDAISLLHRMRSRSAPSSNWHRFLAVVSAPQARQVCSAAPLAWVRAPGEDPPGPGSFFINCFGFDSCRFVVVGITNTIENIVQFFSRVLLLVHGVRLSNWLIQDGSPSLYGVVHERLLAMYICAGHGIEAEKQLREMKLWR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00095 474 Gene3D Transferase(Phosphotransferase) domain 1 2 207 - -
Vian7g00095 474 Pfam Protein kinase domain 8 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00095 474 SUPERFAMILY Protein kinase-like (PK-like) 3 208 IPR011009 -
Vian7g00095 474 MobiDBLite consensus disorder prediction 213 228 - -
Vian7g00095 474 PANTHER CASEIN KINASE-RELATED 3 205 - -
Vian7g00095 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 57 69 IPR008271 GO:0004672|GO:0006468
Vian7g00095 474 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00095 474 SMART serkin_6 3 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00095 474 FunFam CK1/CK1/CK1-D protein kinase 18 205 - -
Vian7g00095 474 MobiDBLite consensus disorder prediction 213 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00095 Vian-Chr7 3970961 3974423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00095 33 200 MAP Kinase Kinase Kinase AT1G62400 29.167 4.44e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vian7g00095 Pkinase 1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00095 K08960 - gmx:100782913 407.142