Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00091 ATGAGAGTTTCTGCACGCAATGATAATTCTGGGAAGGAGAGCAGGTCGACCTCGCCGTTATCACCGTCGGAGGAGGCGCCGCCGTCAGAGTCCAAACCGGAGAAGCGCAACCGGGACTCGAACAAGCACCCGGTGTACCGAGGTGTGCGCATGAGGAACTGGGGAAAATGGGTGTCGGAAATCCGAGAGCCGCGGAAGAAATCGAGAATATGGCTGGGGACATTCCCCACGCCGGAAATGGCGGCGAGGGCGCATGACGTTGCAGCACTGAGCATAAAGGGGAACAGCGCCATCCTCAACTTCCCCGAACTCGCCGCCTCGCTTCCGCGTCCCGTGTCGTTGGCCCCTCGCGACGTGCAAGCCGCAGCGGCCAAAGCGGCTCACACAGACTTCCGTCCTTCGTCCACGTCATTATCATCATCAACATCATCGTTGGTGTCAACAACTTCCTCCTCCTCGTCGTTATCCTCGTCGGTTTCAACTGCGGACTTGTCCGCTGAGTCGGAGGAACTGAGCCAGATCATCGAGTTGCCGAGGTTGGAAACGAGTTACGAGTTGGGAAAGGAGTTTGTGTTCGCAGACTCGCAGGACACGTGGATGTATCAGCCGCCGATACCTTGGTTGCAAACCACGTACGATGCTTCTCAAGCCGACGATGATATTGTAGTGGCAGAGACTGGGCTTGTCAATAGCTTTAAGAGTTTTCTGTGGGATTACTGA 720 0.5611 MRVSARNDNSGKESRSTSPLSPSEEAPPSESKPEKRNRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAASLPRPVSLAPRDVQAAAAKAAHTDFRPSSTSLSSSTSSLVSTTSSSSSLSSSVSTADLSAESEELSQIIELPRLETSYELGKEFVFADSQDTWMYQPPIPWLQTTYDASQADDDIVVAETGLVNSFKSFLWDY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00091 239 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 MobiDBLite consensus disorder prediction 28 46 - -
Vian7g00091 239 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Vian7g00091 239 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 187 - -
Vian7g00091 239 MobiDBLite consensus disorder prediction 1 46 - -
Vian7g00091 239 MobiDBLite consensus disorder prediction 130 159 - -
Vian7g00091 239 MobiDBLite consensus disorder prediction 125 159 - -
Vian7g00091 239 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Vian7g00091 239 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Vian7g00091 239 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Vian7g00091 239 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00091 Vian-Chr7 3859803 3860522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00091 13 213 AP2-EREBP Transcription Factor Family AT5G11590 62.319 4.97e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian7g00091 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00091 K09286 - gmx:100305349 314.309