Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00069 ATGGCACCCAGTTTTGATTGCTTTTCGAGCCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGGGGAGGTTTGGTGGAGGAGTTGGAGGACACGTGGGAGCATCCTATATATGATCGAAATCATAGTCAAATTGAGAACTTGGATGTCCAATATGTGTCGTTTCCATTGCCCAGTGAGGAGTGTTTGAGACTAATGATGGAAACAGAATTGCATCACTTGCCTAATGGTGATTACGTTAATAGGCTGAGGAGTGGGGATTTGGACATTGGGGCCAGAACAGAGGCCATTGATTGGATTGAAAAGGTCCGAGAGCACTTTGGTTTTGGACCTCTCTGTGCGTATTTATCTATAAATTACTTGGACCGTTTCCTCTCTGTTTATGAGTTACCAAAGCAACGAGTTTGGACAATGAAATTGTTGGCTGTAGGTTGCATATCTTTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGAAGATCAATGATGATGAAGCTTCAATTGGAGCTTCAATTTTGCAATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATAGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGACGGCCAAACAGAGAGGGTGTTGAAGTGTGTTAAAATGATCCAAGCTCTGTCATCAAACGATGGTTCTGCTAAGGATTTAATTCCTTCTGTTTCTGTCCCTATGCCTGAAAGCCCAATAAGGGTGTTGAACAATGCATGTTTCAGCTACAAAAGTGATGAACCAAATGCTGCTCTTTGTGCAAATTCTTCACATACTGATACTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 891 0.4242 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWEHPIYDRNHSQIENLDVQYVSFPLPSEECLRLMMETELHHLPNGDYVNRLRSGDLDIGARTEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPKQRVWTMKLLAVGCISLAAKMEETDVPTSLDLQKINDDEASIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGDGQTERVLKCVKMIQALSSNDGSAKDLIPSVSVPMPESPIRVLNNACFSYKSDEPNAALCANSSHTDTPDAKRRKLDKTFGE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00069 296 Gene3D - 67 78 - -
Vian7g00069 296 PANTHER CYCLINS 66 230 IPR039361 -
Vian7g00069 296 SMART cyclin_7 101 189 IPR013763 -
Vian7g00069 296 Gene3D - 79 188 - -
Vian7g00069 296 CDD CYCLIN_AtCycD-like_rpt1 95 190 - -
Vian7g00069 296 SUPERFAMILY Cyclin-like 58 174 IPR036915 -
Vian7g00069 296 MobiDBLite consensus disorder prediction 275 296 - -
Vian7g00069 296 FunFam D6-type cyclin 79 192 - -
Vian7g00069 296 MobiDBLite consensus disorder prediction 281 296 - -
Vian7g00069 296 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Vian7g00069 296 Pfam Cyclin, N-terminal domain 66 191 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00069 Vian-Chr7 2920859 2922880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00069 10 217 Core Cell Cycle Gene Families AT5G65420 40.711 9.06e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00069 K18810 - gmx:100803873 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00069 7 2920859 2922880 Vian7g00069 7 2920859 2922880 ECH