Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00067 ATGGGAGAAGATTGTGGAGCCTGGATTCCGGAGCTGCTTTTTGATCGGCAATCTCCCAGTTTGAGCTCCTTCAATGCTGCACCCTTTGGCACGGGGAAGCAAAATGGTACAGCTGCAGCTATGAATCCAGTTGGCAACTCTGTTGGAAGAGATGCTACAATGCCAGCTTATCTGTCCTCTGGGCTGCCTCATTCACAGCCTGGACATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGTTTCCGGCAGGGATTTACTACACCTGCTCGAATCTTCACTGCAGAGGAAAAGCTCTCTGCTAGCCATGCAAAAGGTTTTGGGGAGGAAATTGCCCCGGTTGAGGGTTTCCCGCAGAAGCAATTCCTGGTTATTGATCAAACTGCTGATCAAACAACTCTGGTTTACAGTTCAAGATTTGGTCGGCCTGTTGAGTGCCTGACTCTGTGGGATTCAAAGCTGCATGGTTCTATAAATTTGAACAAGGAGAATGAATTGCCCTCATTGAGGAGAGATGTAAATCATGTGGCTGGACTTGGACCAACTTTGGATGATAAAGTTGATGAAAATCAGGGAACTGATGATGACATTGAAAGTGAGATGCATGAGGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGATAATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAATGACCACTCACGGTAATCAGGAAGAACCTGGTAGATTAACTGCTGAAGAAGTTGCTAGCTCTGTTGGAGAAACAAAGAAGAGAAAGCTGCAGGAGGGGGCTTATGATGGTGACATGCTGTTCATGGACACTGCTAGTTCTCTGGATGGGAAAATACCCTTTGAAGTTGAAGATGATGCAGAATCAAGATGCTCCAGTGTTGGCAACAATAGTAGTAGAGGGTCCGGTCGAATGGGTTCTTGGTCGGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATTCTGCAGTGCATAGTTCCTGGTGGAAAGGGCAAGGACCCAGTTGAACTTCTTGATGAAGCCATACGTTGCTTGAAATCATTGAAACTCAAGGCCATAAAGCTTGGACTTGATGTGCCATATAAGTTGGAGAATTAG 1152 0.4523 MGEDCGAWIPELLFDRQSPSLSSFNAAPFGTGKQNGTAAAMNPVGNSVGRDATMPAYLSSGLPHSQPGHSGEPHGWFYCLPRFRQGFTTPARIFTAEEKLSASHAKGFGEEIAPVEGFPQKQFLVIDQTADQTTLVYSSRFGRPVECLTLWDSKLHGSINLNKENELPSLRRDVNHVAGLGPTLDDKVDENQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDNDEVTSTGHSPSTMTTHGNQEEPGRLTAEEVASSVGETKKRKLQEGAYDGDMLFMDTASSLDGKIPFEVEDDAESRCSSVGNNSSRGSGRMGSWSGNKKMRKEKIQDVLSILQCIVPGGKGKDPVELLDEAIRCLKSLKLKAIKLGLDVPYKLEN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00067 383 MobiDBLite consensus disorder prediction 234 250 - -
Vian7g00067 383 MobiDBLite consensus disorder prediction 190 204 - -
Vian7g00067 383 PANTHER TRANSCRIPTION FACTOR BHLH145 10 376 IPR037546 -
Vian7g00067 383 MobiDBLite consensus disorder prediction 300 325 - -
Vian7g00067 383 MobiDBLite consensus disorder prediction 178 266 - -
Vian7g00067 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Vian7g00067 383 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00067 Vian-Chr7 2822783 2823934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00067 75 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.667 1.19e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00067 - - gmx:100812109 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00067 7 2822783 2823934 Vian7g00067 7 2822783 2823934 ECH
Vian7g00067 7 2822783 2823934 Vian4g01722 4 33326785 33327906 PCT