Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00065 ATGCGCTACCTCACTTGCAACGCCGAGACAGCAATAGCCATATGCCACCCTCACTCCCCCAAGAAGAACAAAAGGCCCACAAGCCCAACACAGGCCCACACCGTGCCACACTTCGCCTACTCCGACATCCTCGCCGCCACGAACGCTTTCTCCGCCGACACCTTCTTAGGCAAAGGCAGCCACGGCAGAGTCTACAAAGCCACCCTCCACGGCGGCGCGCTCATCGCTGCCGTCAAAAAAACCAAACCTTCTAAGGAGATAGAAATTCTCTCCCACCTCAAAAGCCCGCGCTTGGTCAACCTAATTGGCTTCTGCAACGACCGAACTAACTGCAACAATAGCAAACTCATTGTTGTGGAGTATATGCCCAACGGTTCGCTCCACGACCTTCTCCACTCCACCAAAACGGTTGGGCCTCCCGGTTGGACAGCCCGTGTCCGGTTCGCGGTTCACGTCGCAAAAGCTGTTCGTTTTTTGCACTCGTCTGAACCTCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGACGATAAGTGGAAAGCGCGACTCGGTGACTTCGGACTCGCGTTTCGAGGACACATGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGACGTGAGGCACAGTCCGCCGTCGGTGTTGGATTGGGCGGTGCCGTTGGTCCGCCGTGGCCAGTTCCGGGATATTTGCGACCCCCGGATCGGGGTGCCGCCGAACATGGCAGCGTTCCGCAGGATGATGGTGCTAGCCGCGAGGTGTGTGACGTCAACGGCGGAGAGTCGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGTAAAGAAGAATTTTGACGCAACGCTGGTGTGGATGAGAATGATACGGCGCGTGGTGAAGGCGCGTGGCGATGATTGGGACAGGAGTGAGGAGTATGTGAGATTAGTTAAAGGCGGGAGTAGAAAGAGTAGAAGGAATGGGAAGGTATCTAGCATGTTGGGTGTACAGTATGAGAATGGACCCGCAAATCACATGGTTAGGTCAAGATCCGTTGGTTCTGTTTTTTTCGGGGATGTGAAAATTAACTCGGTTATGGAACGGTACCCTAACCAATTCGGGTTCGGGTATAGGAAGGTAAGGCTAAAGAGATCGATGTCTATGGGGCTTTTGAAACATTATGGTAATGAATCAAATACGTGTCATGAGAGGCATAACGATACTCATAACAATGATTACGTTATAGTGAGTTCCACAGAGATGGAACTTTCAAAGTTGGGTATTGTGGATAAGAATTTGGACTAG 1401 0.5318 MRYLTCNAETAIAICHPHSPKKNKRPTSPTQAHTVPHFAYSDILAATNAFSADTFLGKGSHGRVYKATLHGGALIAAVKKTKPSKEIEILSHLKSPRLVNLIGFCNDRTNCNNSKLIVVEYMPNGSLHDLLHSTKTVGPPGWTARVRFAVHVAKAVRFLHSSEPPVIHRDIKSSNVLIDDKWKARLGDFGLAFRGHMADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSVLDWAVPLVRRGQFRDICDPRIGVPPNMAAFRRMMVLAARCVTSTAESRPTIAEVVECLTAVKKNFDATLVWMRMIRRVVKARGDDWDRSEEYVRLVKGGSRKSRRNGKVSSMLGVQYENGPANHMVRSRSVGSVFFGDVKINSVMERYPNQFGFGYRKVRLKRSMSMGLLKHYGNESNTCHERHNDTHNNDYVIVSSTEMELSKLGIVDKNLD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00065 466 SUPERFAMILY Protein kinase-like (PK-like) 34 314 IPR011009 -
Vian7g00065 466 ProSiteProfiles Protein kinase domain profile. 50 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00065 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Vian7g00065 466 Gene3D Transferase(Phosphotransferase) domain 1 122 328 - -
Vian7g00065 466 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Vian7g00065 466 Pfam Protein kinase domain 53 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00065 466 PANTHER OS01G0253100 PROTEIN 25 314 - -
Vian7g00065 466 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Vian7g00065 466 SMART serkin_6 50 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00065 Vian-Chr7 2735594 2736994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00065 38 311 Receptor kinase-like Gene Family AT3G59420 39.519 2.23e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vian7g00065 Pkinase 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00065 - - vun:114194010 836.639