Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00061 ATGAATCGCTATGGTGGAACTCTATCGAGGAACAACTTGAGGTTTGATTTGGGGAAATTGTGGTTTGGGGAGAGGTTTGGGAATTTGGATTTGTCACATAACGCTGGTAAGATTTCGAACAACGTTGTAGAGCTTCAGAAGTTGAACGTGAGTTACAACCATCTCTATGGTCATATTCCCAAAATCATGTTTCCCACAAGTGCTTCGCCGGTGGCTATGCCGCTGCGGGAGTGGGTACTGGCAGTAGAAGCAATTTTTCGCCTCCACTCCCCTCTCGCCATTTCCTTCTCTTTTTCTTCTGTTCCCCTTCTATCCTCATCCCATTGCCCAATTTCTCTTTCCGAATCAAAACCGGAAAAAGGTTGCAACTTTGGCAAGATTTTGCGACCCCAAAATGAAATTAGATCGTGGGTGCCTAGTTTTGTTGTGGGTGTTGGAGCATTAAGACATAACTGGTTGGGTGCTAACGTACGCTTTGTCGTCTGGGAACGGTTGGAATTGGATGGATCAATTAGCGCCTTACGTCATTTGAGGCAGATTTCTCAAGAGGTTTCTCAGCCAAGTGTAACAGGATGGGGAAGAACGCCTGCAGCTTTACGTGCACTGAGTCAGAGATTGAGCAAGTTTGTGTCACTAATTAATGTTCCTCCAGCAATTCTTCTTAGATTCTTGAGGGAGCACCGGTCAGAATGGGCAGACAACAACATTGATGCCTACTCAGCTGCTGCCATTAAAGCCGGTCCCTGTAGCTTGCCAGGGGCCCGACCAGGAGGAGGTTTTGGGGGTCAGGTTATTCTTCCGCTAGCTCACACAATTGAGCATGAAGAGGCAAGTTATTTGCTTCTAATTTAG 852 0.466 MNRYGGTLSRNNLRFDLGKLWFGERFGNLDLSHNAGKISNNVVELQKLNVSYNHLYGHIPKIMFPTSASPVAMPLREWVLAVEAIFRLHSPLAISFSFSSVPLLSSSHCPISLSESKPEKGCNFGKILRPQNEIRSWVPSFVVGVGALRHNWLGANVRFVVWERLELDGSISALRHLRQISQEVSQPSVTGWGRTPAALRALSQRLSKFVSLINVPPAILLRFLREHRSEWADNNIDAYSAAAIKAGPCSLPGARPGGGFGGQVILPLAHTIEHEEASYLLLI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00061 283 Gene3D Ribonuclease Inhibitor 5 69 IPR032675 -
Vian7g00061 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 212 277 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00061 Vian-Chr7 2505148 2507924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00061 170 276 Homeobox Transcription Factor Family AT4G32880 51.497 1.30e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00061 K09338 - var:108337859 136.732