Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00050 ATGCGTGAAGATGTTGAATCTACTGTGATGAGAGAGCTAGGGTCAAAACCAAAGGTAGGTGATGGGATAAATGATGCACCCTCTTTGGTTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCAGATGTAGCATCTATTATACTTAAAAGGAACAAAATTTCACAAGTGGTGAGGATGGTGGCACGAAGCGTCAATGAAAGATGGACATGGTTGCGCGTGAATGAAGAAGCGGCGCTGCTCATGGTGGTGGTCCGATGCAAGCTTGGAGGATAA 294 0.4592 MREDVESTVMRELGSKPKVGDGINDAPSLVVADVGIALQNEAQENAASDVASIILKRNKISQVVRMVARSVNERWTWLRVNEEAALLMVVVRCKLGG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00050 97 SUPERFAMILY HAD-like 18 74 IPR036412 -
Vian7g00050 97 PANTHER ATP7, ISOFORM B 19 69 - -
Vian7g00050 97 Gene3D - 3 77 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00050 Vian-Chr7 2221846 2223897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00050 2 70 Primary Pumps ATPases AT4G30110 33.333 2.56e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00050 K17686 - gmx:100127402 79.7221