Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00032 ATGGCCAGCGCTCCTTCTCCACGCGAAGAGTTCGTGTACATGGCCAAGCTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCTGCCGCCGCCGAGAACGAGGAACTCTCTGTCGAGGAGCGCAACCTCCTCTCCGTCGCTTACAAGAACGTCATCGGCGCCAGACGTGCCTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGAGGACCACGTCGCCGTTATCCGCGACTACCGATCCAAGATCGAGAGCGAACTCTCCAACATCTGCGACGGAATCCTCAAGCTCCTTGACTCGCGCCTCGTTCCCTCCGCTGCCTCTGGTGACTCCAAGGTCTTTTACCTCAAAATGAAGGGCGACTACCACAGGTACCTCGCCGAGTTCAAGACCGGTGGCGACCGCAAAGAGGCCGCAGAGAGCACGCTCTCCGCCTACAAATCTGCACAGATTCGTGATTTGATTGATTGTCTAGAAGACTCTGGGTTCTCTGTGGCTTTTGACGAGGCAATTGCTGAATTGGATACACTGGGCGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTTACCCTCTGGACCTCTGACATGCAGGATGACGGTGCAGATGAAATTAAAGAAGCCGCGCCTAAAGGTGACGGGGAACAAAATTAA 708 0.5523 MASAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAAENEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDSRLVPSAASGDSKVFYLKMKGDYHRYLAEFKTGGDRKEAAESTLSAYKSAQIRDLIDCLEDSGFSVAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGDGEQN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00032 235 Coils Coil 14 41 - -
Vian7g00032 235 Gene3D - 173 227 IPR036815 -
Vian7g00032 235 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vian7g00032 235 PIRSF 14-3-3 176 224 IPR000308 -
Vian7g00032 235 PIRSF 14-3-3 2 166 IPR000308 -
Vian7g00032 235 Pfam 14-3-3 protein 178 212 IPR023410 -
Vian7g00032 235 Pfam 14-3-3 protein 14 162 IPR023410 -
Vian7g00032 235 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vian7g00032 235 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vian7g00032 235 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vian7g00032 235 ProSitePatterns 14-3-3 proteins signature 2. 194 213 IPR023409 -
Vian7g00032 235 PANTHER 14-3-3 PROTEIN 178 216 IPR000308 -
Vian7g00032 235 SMART 1433_4 8 225 IPR023410 -
Vian7g00032 235 SUPERFAMILY 14-3-3 protein 7 214 IPR036815 -
Vian7g00032 235 Gene3D - 1 169 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00032 Vian-Chr7 1549926 1552048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00032 6 235 14-3-3 family AT1G78300 75.676 8.40e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00032 K06630 - nnu:104608650 374.785