Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00031 ATGGTTTGTTTGTTTCAGTTAACTGAGTATGGTTTACTTGTCAGGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGTACTGTTGGGGTGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGTTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATGGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGTGGAGATGCATATCCACCAGAGGTATATTCCGAGTTGCATTACCAATTTTCTGCTGGAATGCAGCCAACTAAGGCTAAACTCCACCCTGAAACAATGGAAAAGAGCAAAATTCAAATGCTTTATGATGCTTCTCATGCCCTGTTCTCTCAAAAGGAGCTTCCAACTTTTCAACAAATCCATTATGTAAAAGATTTGCTAGACAAGATTGAAGCTATGGATTTGGGAATCGACGAGTTGGGGATGTGTGATTCTCCTTTGTCAGATGCAAGTGGTGATAGCAGCAAGGGACTGATGGGTGTGTTCTGTCTTCCAGCAGGAAAAGTATTTCCTCTTCATGATCACCCAGAAATGACAGTGTTGAGTAAGCTGTTGTATGGTTCTGCTTATGTTAAAGCTTATGACTGGATTGCATTGGATTGTTCCGGAACCCAAACTGTAGGATTAGGTGGGAAGGTTGTGGATGAAGTAATGAAAACACCACATGAGCCATCGATATTGTTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACACCTTGTGCAATACTAGATGTGCTTTCTCCACCATATTCTGAAGACTTTGGAAGACCCTCCACTTACTTTTCAGATATTCCTATTCCTTCTCTTCATGGTTATGCTATACTTGAGGAGAGATCCGTTCCTAGTGACCTAGTTGTTCGAGGAGCACCATATATTGGACCTCCAATTGTAACAGTGAACCAATACCAATTTTGA 1056 0.4205 MVCLFQLTEYGLLVRLLIWEDHYYEPLPSPFPPRTVGVSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSGDAYPPEVYSELHYQFSAGMQPTKAKLHPETMEKSKIQMLYDASHALFSQKELPTFQQIHYVKDLLDKIEAMDLGIDELGMCDSPLSDASGDSSKGLMGVFCLPAGKVFPLHDHPEMTVLSKLLYGSAYVKAYDWIALDCSGTQTVGLGGKVVDEVMKTPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEDFGRPSTYFSDIPIPSLHGYAILEERSVPSDLVVRGAPYIGPPIVTVNQYQF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00031 351 PANTHER UNCHARACTERIZED 141 343 IPR012864 GO:0016702
Vian7g00031 351 Pfam PCO_ADO 202 343 IPR012864 GO:0016702
Vian7g00031 351 CDD cupin_ADO 202 298 - -
Vian7g00031 351 Gene3D Jelly Rolls 131 310 IPR014710 -
Vian7g00031 351 SUPERFAMILY RmlC-like cupins 138 308 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00031 Vian-Chr7 1520336 1525214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00031 16 125 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 43.636 1.15e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00031 K23953 - gmx:100811165 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00031 7 1520336 1525214 Vian7g00031 7 1520336 1525214 ECH