Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00030 ATGGAGCGCTATGAGATTCTCAAAGATATTGGCTCTGGGAATTTTGCTGTCGCCAAACTGGTTAGGGAAAACCGCACCAATGAGCTTTTTGCTGTCAAGTTCATTGAGAGAGGCCAGAAGGCAAGATTTTTCTTTCAGCAACTGATATCTGGAGTCAGTTACTGTCATTCAATGTCATCAGTATTGCATTCTCAACCTAAGTCAACGGTAGGAACTCCAGCTTATATTGCACCTGAGGTTCTTACGAGGAAAGAATATGATGGAAAGATTGCAGATGTATGGTCTTGTGGAGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCTTTTGAAGACCCTGGAGACCCAAGAAACTTCAAAAAAACCATTGGTGTGAGTAAAATAACTGATGGCTGCAAATTTGTTGAATCCTTAAACAATTTTAGTATTAATATAAGAGTTAGTTGTTTGGTTTCACTTTCTCACGATATGGTGTTTCAATTGGACCCTTTGTGGCTTATACAGAAGATACTTAGTGTCCAGTACTCAGTCCCAGATTATGTACGAGTTTCCATGGAATGTAGACATCTTCTATCACAAATATTTGTGGCAAGTCCTGAAAAGAGAATAACAATACCAGAAATTAAAAACCATCCATGGTTTTTAAGGAACTTACCCATAGAACTGATGGAAACTGGAAGCTGGCAAGTAAATGATGTAAATAATCCATCACAAAGTGTTGAGGAAGTGCTGTCTATAGTACAAGAGGCAAGAAAATCTCTTAATGTTCCAATTGTTGGTGGCCTTCTTAATGGGGGCACCATGGACCTGGATGACTTGGAGGCTGATGAAGAAGATCTTGAGGATGTAGAAACAAGTGGAGAATTTGTGTGTCCTCTTTGA 882 0.3934 MERYEILKDIGSGNFAVAKLVRENRTNELFAVKFIERGQKARFFFQQLISGVSYCHSMSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPGDPRNFKKTIGVSKITDGCKFVESLNNFSINIRVSCLVSLSHDMVFQLDPLWLIQKILSVQYSVPDYVRVSMECRHLLSQIFVASPEKRITIPEIKNHPWFLRNLPIELMETGSWQVNDVNNPSQSVEEVLSIVQEARKSLNVPIVGGLLNGGTMDLDDLEADEEDLEDVETSGEFVCPL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00030 293 SUPERFAMILY Protein kinase-like (PK-like) 2 222 IPR011009 -
Vian7g00030 293 Pfam Protein kinase domain 64 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00030 293 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00030 293 Gene3D Transferase(Phosphotransferase) domain 1 61 221 - -
Vian7g00030 293 SMART serkin_6 4 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00030 293 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Vian7g00030 293 PANTHER SERINE/THREONINE KINASE 65 233 - -
Vian7g00030 293 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00030 Vian-Chr7 1492794 1495656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00030 6 218 CBL-interacting serine-threonine protein kinases AT5G10930 28.626 1.24e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vian7g00030 Pkinase 9.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00030 K14498 - gmx:100798091 353.214