Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02099 ATGATTCCAGAGTTGATGAAGAAGGTGGGGAGCATGGTGGAGGGGGAGGTGGTGCTCAAGTACCAGCTTGTCCCGGAAGATCTGGACGCGTTGGTGTCTGTTAGGACGGAGGAAGATGTGAAGCACATGATCCAGGAGCACGACCGCCACCACATAGGATTGCTCCGTGCATTCCTCTTTCCCTCTAACAAGATGTGTTTGGCTGCGTCGGAAACCTATCCATTGGAGCAACGTTACATCGACGCCGTGAATGGGATCCTGAGAACAAGCCCTAAGGCCACGACCAGGGGCTCTGCGTGTTCTTCCCCGAAATCAATCTCACCAGATGCAGGGGATCAGTACTCCCCTCGCTTTGGCAATTCGATATCCATATCCAGTGCGATGCAGATGCAGAGAGTGCGAAGCTCTCCCAGCCTCTCCAACATGGATCAGCAAGCTCATTACCACCAACATTCCCATCTCCCTTTTCACAACTATCCATCTTTCTCTACCACTAGACCCCCCCAAGATCCTCAAATAACAAGACTTGGTGGAAGGGGTGCCTCCTTCAACCACCACCACTCAAACCCCAGACAACCCCCCAGAGGACTAGGACCCTACGGCTACCCTGACGACTCTGCAACTTATGGGAATGCCCTTCATAACATCCCCAGAAGTCCCAGAAGAAAATCTATATGGGAGTAA 684 0.5234 MIPELMKKVGSMVEGEVVLKYQLVPEDLDALVSVRTEEDVKHMIQEHDRHHIGLLRAFLFPSNKMCLAASETYPLEQRYIDAVNGILRTSPKATTRGSACSSPKSISPDAGDQYSPRFGNSISISSAMQMQRVRSSPSLSNMDQQAHYHQHSHLPFHNYPSFSTTRPPQDPQITRLGGRGASFNHHHSNPRQPPRGLGPYGYPDDSATYGNALHNIPRSPRRKSIWE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02099 227 MobiDBLite consensus disorder prediction 162 227 - -
Vian6g02099 227 SUPERFAMILY CAD & PB1 domains 3 65 - -
Vian6g02099 227 MobiDBLite consensus disorder prediction 92 115 - -
Vian6g02099 227 PANTHER OS05G0427100 PROTEIN-RELATED 3 189 - -
Vian6g02099 227 Pfam PB1 domain 3 61 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02099 Vian-Chr6 37972164 37972847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02099 4 90 MAP Kinase Kinase Kinase AT5G57610 37.500 1.43e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02099 - - vun:114186951 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g02099 6 37972164 37972847 Vian6g02099 6 37972164 37972847 ECH