Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02081 ATGGCTACCATTTTCGCTTTCATTTTCATATTTTTCTCCCTCATCGCCTCCAACTATGCCTTCGATTCCTTGGATCCTTTTGGTAACATCACCATCACATGGGATTATTTCTCCGACAACGGGGACACAGTCGACGTGAGGGTATCGATATACAACTTCCAACTATTTCGTCACGTGGAGGAGCCTGGTTGGAGATTGGGTTGGGCATGGAAAGGTGACGAGGTGATTTGGTCAATGCTGGGAGCAGAGGCAAAGGAACAAGGGAACTGCACAAGATTTAGAGGACAACAGAAACCACATTGTTGCAAGAAAGAACCAGTTATCATTGATCTAATGCCTGGAACCCCCTACAACATGCAGACCGCAAATTGCTGCAAAGCTGGGATCCTTACATCCCTTAAACAAGATCATACAAAACTTGGTGCCACCTTCCAAATGAATTATGTCAAACCATCCGATTCAGGTCCCGGTTTTACCATGCCAGAAAATTTCACCCTTGGAATTCCAGGCTATAGCTGTGGGACACCGTTTCAAGTCCCGCCGACCATGTTTACCAAAGATGGACACAGATGGCAACAAGTCTTGGTTTCTAGCATCACCTGCTCCAAAATGCTGCGTCTCTCTGTCTGCATTCTACAACAGTACTATTGTTCCTTGTCCCACATGCAGTTGCAATTGCCAAGGACTACCAGGAGCAACTTGTGTGGAGTAATTAATTCTTCTCATCCTGATTCAGATAAGACTTCAGTGTTGCAACCACCGCAAACAAATCGCGGAGAAGCAGCAGCAGTGGTGATCAGGTGTTCACATCACATGTGCCCCATTCGTATTCACTGGCATGTGAAACAAAGTTACAAAGAGCACTGGCGGGTGAAGATCACAATCACAAACATGAACTTTGTGAAAAACTATTCCCAATGGAATTTGGTGGTGCAGCATCCTAACTTAGCGAATGTAACACAAGTGTTCAGTTTCAACTACGAACCTCTGACAGTTTATGGAAAATTGAGAGACATAGGGATGTTTTGGGGGCTGGCGTATTACAATGACATGCTGCTGACACATGGAGAGAATGGGAATGTGCAAACAGAGGTTTTACTGCATAAAGATAGAGGAAAGTTCAGCTTCAGAGAAGGGTGGAGTTTTCCTAGAAAAGTTTCGTTCAATGGCGATGAATGTGTGATGCCGTCTCCTGATGCATATCCTAGACTTCCCAACGCAGCTCATGTTGTCATAACAAGCTTTAACACAATTTTCTTTTCACTGTTACTTATACTCTTATAG 1284 0.4424 MATIFAFIFIFFSLIASNYAFDSLDPFGNITITWDYFSDNGDTVDVRVSIYNFQLFRHVEEPGWRLGWAWKGDEVIWSMLGAEAKEQGNCTRFRGQQKPHCCKKEPVIIDLMPGTPYNMQTANCCKAGILTSLKQDHTKLGATFQMNYVKPSDSGPGFTMPENFTLGIPGYSCGTPFQVPPTMFTKDGHRWQQVLVSSITCSKMLRLSVCILQQYYCSLSHMQLQLPRTTRSNLCGVINSSHPDSDKTSVLQPPQTNRGEAAAVVIRCSHHMCPIRIHWHVKQSYKEHWRVKITITNMNFVKNYSQWNLVVQHPNLANVTQVFSFNYEPLTVYGKLRDIGMFWGLAYYNDMLLTHGENGNVQTEVLLHKDRGKFSFREGWSFPRKVSFNGDECVMPSPDAYPRLPNAAHVVITSFNTIFFSLLLILL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02081 427 Pfam COBRA-like protein 46 201 IPR006918 GO:0010215|GO:0016020
Vian6g02081 427 PIRSF COBRA 1 427 IPR006918 GO:0010215|GO:0016020
Vian6g02081 427 PANTHER PROTEIN COBRA 7 422 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02081 Vian-Chr6 37819668 37821631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02081 4 405 COBRA Gene Family AT1G09790 47.458 1.47e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02081 - - lang:109329241 568.155