Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02072 ATGGCAGAGGTGCTGCAGCAGGGTCGCTCTCTGGCTGAGACACCAACATATTCAGTTGCTTCTGTTGTTGCTGTCATGGTTTTTGTCTGCTTATTGGTTGAACGTTCTATCTACCGCTTTGGAGAGTGGTTGAGGAAAACAAGAAGGAAGGCACTTTTTGCATCACTGGAGAAACTTAAGGAAGAGCTGATGTTGCTGGGGCTTATCTCTTTGCTGTTGGCACAAAGTGCAAGGTGGATCTCTGAAATTTGTGTGAATTCGTCACTTTTTAGCAGTCGATTTTATATTTGTTCTGAACAAGACCTGGACATCAATGAGAATATCATGCTGGAAAGCTCATCATCTATACCTGGTGAAACTAGTATTCCAAAGGGATTAAATAATGGAGCATTCAACCAATGTGGAGAGGGTCATGAACCGTTTGTTTCATACGAGGGTCTTGAGCAGCTGCACCGGTTTTTGTTTGTTCTCGGAATCACTCATGTTTTGTATAGCTGTCTGGCAGTTGGTTTGGCGATGAGCAAGAATCTTCAAGATCAACAGAAATGTTTTCTTTCAATTTTGGTCTTTGTGTTTTCTTGCATTGACATTGTTGAGAACCCAACCGTCTTTGTTCAAGGGATTCTTGATCCAATCAATCACTTCTTGTTATCTATAGTTGGCGCAGATGGGAAAATCAGGCTAGGATGCCAAGCGATGGAAACCAGCAAGCTCTGTTTTCTACGTCAGTTTAGGAGCTCTATACGAAAATCAGATTACCTCGCACTACGTTTAGGATTCATCACTCTGGATGCTTTGGATTTATGCCATAGTGTGCATCTTCGTGAACATCCACGGTCTGAATATATACTTCTGGCTATCATTTATCCCAGCAATTGGGCAAAGCTTCAACATGTTGTATCAACCTTGGCACTTGAAATTATGGAGCAGAGAGGTCCGTTTCCCAGGACACAAGTAAGAATAGATACACTTTATAGCCAGGTCATGCTGCATGGTTGTGTTTTCTGTTCTTATTTTCTCTACTGTTCACGCAGAATGCATTCGAAATGGCAACCTTTATTTGGACACTGTGCTATTGTTCAGTTCTGGTGTAGCTATATGACAGTGCCTCTGAATATAATAGTTTGTCAGATGGGATCTCGATGTAAGAAGGCCTTAGTGGCGGAGAGAGTTAGAGAGTCCCTGCATAGTTGGTGTAAAAGAGTGAAACACAAGTCTAAGCATGATTCGTTGCATTCACACACGGCAAGATCAGTATGCTCCCTCGAATCAACAATCGATGAGAGGGACGAAATAACAGTGGCATCTGGTACTCTGACTCGAAGCTCTTCTTTAGCCTCTTTGAATCAGATAACAGTGAGTTCAGTAGACCAGCTGAACTTCGAGACTCCCAACAAAGCAAAAGATTCAATCAAGGTGGCTGGATGTTTGTCTGAATCTGTACATACGAATCCCCCACAACCGTCCCACAACGTTGAAGATCGTGTCGGTAATGGAGAGGAAGCAAAAGCTATCACTCTCCTTGATTTGTTTCAGAAAACATCATTAAATTAG 1554 0.4241 MAEVLQQGRSLAETPTYSVASVVAVMVFVCLLVERSIYRFGEWLRKTRRKALFASLEKLKEELMLLGLISLLLAQSARWISEICVNSSLFSSRFYICSEQDLDINENIMLESSSSIPGETSIPKGLNNGAFNQCGEGHEPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKNLQDQQKCFLSILVFVFSCIDIVENPTVFVQGILDPINHFLLSIVGADGKIRLGCQAMETSKLCFLRQFRSSIRKSDYLALRLGFITLDALDLCHSVHLREHPRSEYILLAIIYPSNWAKLQHVVSTLALEIMEQRGPFPRTQVRIDTLYSQVMLHGCVFCSYFLYCSRRMHSKWQPLFGHCAIVQFWCSYMTVPLNIIVCQMGSRCKKALVAERVRESLHSWCKRVKHKSKHDSLHSHTARSVCSLESTIDERDEITVASGTLTRSSSLASLNQITVSSVDQLNFETPNKAKDSIKVAGCLSESVHTNPPQPSHNVEDRVGNGEEAKAITLLDLFQKTSLN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02072 517 PANTHER MLO-LIKE PROTEIN 1 356 444 IPR004326 GO:0006952|GO:0016020
Vian6g02072 517 Pfam Mlo family 357 425 IPR004326 GO:0006952|GO:0016020
Vian6g02072 517 Pfam Mlo family 9 175 IPR004326 GO:0006952|GO:0016020
Vian6g02072 517 Pfam Mlo family 238 264 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02072 Vian-Chr6 37748510 37753591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02072 1 458 MLO family AT1G11000 49.237 1.77e-129 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02072 K08472 - gmx:100801624 544.273