Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02042 ATGGGGAAAAGTGAGCAACAGCATGTGCAGGAAGAAGGGCAGAGTGGTGGGAGTGAGGTTGAGGCTCCACTCTGTTGGGTCCTTCTTCGACCATTCAGTTTCAAGTGTCTGTTCCTTCTCCTTCTCAGTTTGTCGGCTTTGATTTCTTCACTCTTTTGGGTTCTTCCCAGGCACAACGTTACTTATAGTTTTGATGCAAGAGATGTAATTAAGCAAAATGCTGCTGTCCAGACATCCTTCAGACTGGAAAAACCAGTTTCACAGCTTATTCCATATATTGAAACGTTAGAATATGATATATATGGCGAAATAGCTCTACCAAATACAAAGGTGGCTATCCTGTCCATGCACCAAAGTATTACACCTAACTGTACTGACGTGGTGTTTGGTGTTCTGTGTGATCCGATGAACGGTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGATCATCTTTGATTGAACTGTTTCTCAAGCAATCCAACCTGACTTTGACACCATCAATATTTGGGAATGCATCGATATTTGAAATCTTGAAGTTTCCTGGAGGATTAACTGTAATACCACCGTACTCTGCTTACATTTGGCAGATGCCTGAGGTTCTGTTTAATTTTACTCTTAATAATTCAATATCTGAAATACTGGAGAATTTTGATGACTTCAAGGAAGAATTGAAGTTTGGATTGCATCTAAACTCTGACGAGAATGTGTACGTGCAAATAACAAATGAAAATGGCTCAACGACAGCTCCTCCAGTAGTAGTCCAGGCTTCAATCATGCCAGGCTTTGGTAGTCTCTTGCCCCAAAGATTAAAACAATTAGCTCAAACAATAACAGGTTCTGCTGGCAAAAATCTTGGCCTTGATAACTCAGTTTTTGGCAGAGTTAAAGAAGTCAGGCTATCTACTTTCTTGAAGAAAAAACTTCATGCATCCTCACCTTCTCCTTCTCCAGCTCCATCCCCACAGTTAAGTGATCACTCTGAGCCATCAACTTCACCACATCCTGCTAGTCCGTACTCTCCAATATCACCTGCAACTGCTGAGCCATCTCCCTGTTTTGACTGTGAAGTATCTTCACCTGCACCATCTATTGTGCCTGAGCATCCTCCTGATCCTTGTCCATATAGTGGCTTCGTACATCATCCCATCTCTTCACCAAAATCTTATTCTAAACCATCCATTTCCCCTGATTATTCACCTTCTGCTGCCCCCACCTCGAATTCTGCCAGCCACACTACTGAAGAAGCTTCTGATCTGTATCATGGATCCAAGCGTCGGCAGGGTATAGAAACATCTAAAAAATTGGTGTCTCAGATGCATGCTCCATCCTCTATATCATCAGCGGGTGGTGATTTCCGAGGGGAAATATTGCTAATGGGACTTTGTATGCTGTTAATTTCTTTTTCTTTTTGTCAATGA 1419 0.4214 MGKSEQQHVQEEGQSGGSEVEAPLCWVLLRPFSFKCLFLLLLSLSALISSLFWVLPRHNVTYSFDARDVIKQNAAVQTSFRLEKPVSQLIPYIETLEYDIYGEIALPNTKVAILSMHQSITPNCTDVVFGVLCDPMNGSINPVSLSVLRSSLIELFLKQSNLTLTPSIFGNASIFEILKFPGGLTVIPPYSAYIWQMPEVLFNFTLNNSISEILENFDDFKEELKFGLHLNSDENVYVQITNENGSTTAPPVVVQASIMPGFGSLLPQRLKQLAQTITGSAGKNLGLDNSVFGRVKEVRLSTFLKKKLHASSPSPSPAPSPQLSDHSEPSTSPHPASPYSPISPATAEPSPCFDCEVSSPAPSIVPEHPPDPCPYSGFVHHPISSPKSYSKPSISPDYSPSAAPTSNSASHTTEEASDLYHGSKRRQGIETSKKLVSQMHAPSSISSAGGDFRGEILLMGLCMLLISFSFCQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02042 472 MobiDBLite consensus disorder prediction 307 345 - -
Vian6g02042 472 MobiDBLite consensus disorder prediction 386 416 - -
Vian6g02042 472 MobiDBLite consensus disorder prediction 417 431 - -
Vian6g02042 472 MobiDBLite consensus disorder prediction 386 436 - -
Vian6g02042 472 PANTHER F20B24.21 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02042 Vian-Chr6 37494179 37498436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02042 1 304 C3H Transcription Factor Family AT3G10810 41.720 7.23e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02042 - - gmx:100788006 721.85