Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02038 ATGGCTCATGCAACAACGTACGTGGTTGGAGGATCCATTGGTGGTTGGGCCTTCAACATGACTGGTTGGCCTAATGGAAAGAGTTTTAAGGCAGGGGACATACTAGTATTCAATTACAATCCGACATATCACAACGTGGTGATAGTGGACGAGGCTGGATACAATACGTGCACTGCTGGAGAAGGATCAAAAACGTATCAGTCAGGACATGATAGCATTACTCTTGCCAAAGGAACGAACTACTTCATCTGCACTTTTGATGGTCACTGCGAGGCTAAGATGAAAATTGCAGCGACGGCTGCATGA 306 0.4608 MAHATTYVVGGSIGGWAFNMTGWPNGKSFKAGDILVFNYNPTYHNVVIVDEAGYNTCTAGEGSKTYQSGHDSITLAKGTNYFICTFDGHCEAKMKIAATAA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02038 101 SUPERFAMILY Cupredoxins 6 97 IPR008972 -
Vian6g02038 101 ProSiteProfiles Phytocyanin domain profile. 5 101 IPR003245 GO:0009055
Vian6g02038 101 Pfam Plastocyanin-like domain 19 93 IPR003245 GO:0009055
Vian6g02038 101 Gene3D - 3 101 IPR008972 -
Vian6g02038 101 FunFam basic blue protein-like 5 100 - -
Vian6g02038 101 CDD Plantacyanin 5 100 IPR041844 -
Vian6g02038 101 PANTHER BLUE COPPER PROTEIN 4 98 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02038 Vian-Chr6 37460618 37461231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02038 3 100 Phytocyanin Superfamily AT1G17800 43.564 7.01e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02038 - - mus:103987231 149.058