Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02037 ATGAGTGCAATAGTTGTTGTATCGTTGTGTACGTTGCTGCTTTGCTCTGACATGGCTCATGCAAACACCTATGTGGTCGGAGGTAGAGATGGTTGGAGTACAAACGCTTCTTCTTGGAGTGGAAAGGTTTTCAAGACCGGTGATGAATTATTATTTGTTTATGATGCCACAAAACACAACGTGGTGGTAGTAGATCAAGGAGGATACAATTCATGCAGTGCTTCAGCAGGATCAAAAACTTATCAGACAGGACATGATTATATTCAGCTACTCAAAGGACTAAGCTACTTCATTTCCTCTTTTCCTGGTGACTGTGAGGCTGGGACGAAATTTTCAGTTACTGCTCAATAA 351 0.416 MSAIVVVSLCTLLLCSDMAHANTYVVGGRDGWSTNASSWSGKVFKTGDELLFVYDATKHNVVVVDQGGYNSCSASAGSKTYQTGHDYIQLLKGLSYFISSFPGDCEAGTKFSVTAQ 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02037 116 SUPERFAMILY Cupredoxins 23 115 IPR008972 -
Vian6g02037 116 Gene3D - 22 115 IPR008972 -
Vian6g02037 116 CDD Plantacyanin 23 115 IPR041844 -
Vian6g02037 116 PANTHER BLUE COPPER PROTEIN 21 114 IPR039391 GO:0009055
Vian6g02037 116 ProSiteProfiles Phytocyanin domain profile. 22 116 IPR003245 GO:0009055
Vian6g02037 116 Pfam Plastocyanin-like domain 35 108 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02037 Vian-Chr6 37457828 37458284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02037 3 115 Phytocyanin Superfamily AT1G17800 41.667 5.63e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02037 - - ini:109167127 124.79