Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g02018 ATGGAAGCAATCGCTTTAACTTCAGTAACGTTCACTACTGCCATATCCAATCTCATCCCAGCTCTCACCTTCATCATATCCCTTTCCTTCGGATTGGAGAGATTGAATTTAAAAACAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATTAGTGGAGCAATGATTCTAACTTTCTTGAAAGGCCCAGAAGTTCAGATGCTTTCGTTCCACATGAATCTTTTCAACCATCCAAGTGGCAATGTCGTACATCCACACGCTACTTCTGGCGTTATGACCATATTCGGTGCACTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTATGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCTTATTCAAGCACAGCGTTAATGTCCCTAATGGGGGCACTGTTATCCGTTTCTTATGCATTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGATTGGGCTGGAATATCAGACTGTTGACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCGCGAGAGGTCCATTGTTTGTCTCTATTTTTAGCCCTCTTATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAGCTATATCTTGGGAGCATAATTGGATCAGTGATGATTATTTGCGGATTATACGTGGTTCTGTGGGGTAAAAGCAAAGAGATGAAGAAGAATCAACCGGTTCCATCAGAAAGCGCCCATAAATTAGACACAGTAGAAATAATGGTCAAACCTCGAGTAGAAGAAAAGAGCAACAATAGCAATAGCCTGGTGAATGCAGTAAATGCGGTTGGGGAAAATGGAGAGAAGAAGTAA 876 0.4315 MEAIALTSVTFTTAISNLIPALTFIISLSFGLERLNLKTAGGKAKIIGTITGISGAMILTFLKGPEVQMLSFHMNLFNHPSGNVVHPHATSGVMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSVSYAFCVERDLSQWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRARGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYVVLWGKSKEMKKNQPVPSESAHKLDTVEIMVKPRVEEKSNNSNSLVNAVNAVGENGEKK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g02018 291 MobiDBLite consensus disorder prediction 268 291 - -
Vian6g02018 291 Pfam EamA-like transporter family 97 235 IPR000620 GO:0016020
Vian6g02018 291 PANTHER WAT1-RELATED PROTEIN 3 248 IPR030184 GO:0016020|GO:0022857
Vian6g02018 291 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 240 - -
Vian6g02018 291 MobiDBLite consensus disorder prediction 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g02018 Vian-Chr6 37285267 37286987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g02018 1 243 Nodulin-like Gene Family AT1G68170 47.737 3.46e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g02018 - - gmx:100788378 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g02018 6 37285267 37286987 Vian6g02018 6 37285267 37286987 ECH
Vian6g02018 6 37285267 37286987 Vian1g02943 1 48206297 48212223 PCT